| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g07484 | 5:13,775,936-13,787,442 | + | C1H5g16123 | CX5g037642 | LOC_Os05g28300 | Os05g0350700 | - | Detail |
| C2H5g28285 | 5:13,791,733-13,792,716 | - | C1H5g17008 | CX5g040736 | LOC_Os05g28320 | Os05g0350900 | Os2R_MYB54 | Detail |
| C2H5g17200 | 5:13,831,378-13,834,042 | - | C1H5g29097 | CX5g038755 | LOC_Os05g28370 | Os05g0351500 | - | Detail |
| C2H5g14159 | 5:13,855,356-13,860,034 | + | C1H5g24445 | CX5g039488 | LOC_Os05g28460 | Os05g0352700 | - | Detail |
| C2H5g18746 | 5:13,861,546-13,863,093 | + | C1H5g20523 | CX5g039121 | - | - | - | Detail |
| C2H5g08977 | 5:13,869,047-13,871,676 | + | C1H5g18199 | CX5g038297 | LOC_Os05g28470 | Os05g0352750 | - | Detail |
| C2H5g02545 | 5:13,872,775-13,878,844 | - | C1H5g21672 | - | LOC_Os05g28480 | Os05g0352800 | RBR7 | Detail |
| C2H5g16901 | 5:13,881,006-13,886,222 | + | C1H5g31266 | CX5g037212 | LOC_Os05g28500 | Os05g0353300 | - | Detail |
| C2H5g04356 | 5:13,891,670-13,896,461 | + | C1H5g01450 | CX5g036875 | LOC_Os05g28510 | Os05g0353400 | - | Detail |
| C2H5g23280 | 5:13,897,165-13,899,858 | - | C1H5g21568 | CX5g037535 | LOC_Os05g28520 | Os05g0353500 | - | Detail |
| C2H5g14457 | 5:13,931,125-13,953,580 | + | C1H5g30908 | CX5g038072 | - | Os05g0354300 | - | Detail |
| C2H5g03381 | 5:13,957,001-13,960,874 | - | C1H5g19735 | CX5g039139 | LOC_Os05g28630 | Os05g0354400 | - | Detail |
| C2H5g23698 | 5:13,993,668-13,999,470 | + | C1H5g04066 | CX5g038844 | LOC_Os05g28690 | Os05g0355133 | - | Detail |
| C2H5g12189 | 5:14,011,301-14,013,798 | - | C1H5g01589 | CX5g039115 | LOC_Os05g28730 | Os05g0355300 | - | Detail |
| C2H5g22794 | 5:14,019,936-14,020,901 | + | C1H5g26406 | CX5g039096 | LOC_Os05g28740 | Os05g0355400 | - | Detail |
| C2H5g06435 | 5:14,021,837-14,022,797 | - | C1H5g06096 | CX5g037815 | LOC_Os05g28750 | Os05g0355500 | - | Detail |
| C2H5g10884 | 5:14,028,336-14,030,959 | + | C1H5g09726 | CX5g040847 | LOC_Os05g28770 | Os05g0355700 | - | Detail |
| C2H5g23986 | 5:14,032,671-14,033,959 | + | C1H5g23139 | CX5g036860 | LOC_Os05g28780 | Os05g0355900 | - | Detail |
| C2H5g26311 | 5:14,037,487-14,042,688 | - | C1H5g03602 | - | - | - | - | Detail |
| C2H5g00165 | 5:14,076,439-14,077,098 | + | C1H5g23229 | CX5g036750 | LOC_Os05g28810 | Os05g0356500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g034076 | 4:17,347,092-17,347,565 | - | C1H5g19097 | C2H2g02746 | - | - | - | Detail |
| CX4g032656 | 4:17,349,663-17,353,902 | - | C1H4g11558 | C2H4g17905 | LOC_Os04g33700 | Os04g0413000 | - | Detail |
| CX4g032780 | 4:17,355,767-17,356,387 | - | - | - | LOC_Os04g33710 | Os04g0413100 | - | Detail |
| CX4g033899 | 4:17,356,851-17,359,245 | + | C1H4g19570 | C2H4g06805 | LOC_Os04g33720 | Os04g0413200 | OsCIN3 | Detail |
| CX4g035303 | 4:17,364,048-17,369,240 | + | C1H4g06839 | C2H4g13973 | LOC_Os04g33740 | Os04g0413500 | GIF1, gif1, CIN2, OsCIN2, OsGIF1, WB1 | Detail |
| CX4g031965 | 4:17,387,179-17,387,928 | + | - | C2H4g20318 | LOC_Os04g33760 | Os04g0413900 | OsS40-6 | Detail |
| CX4g031791 | 4:17,391,751-17,395,712 | + | C1H4g19252 | C2H4g25683 | LOC_Os04g33770 | Os04g0414000 | - | Detail |
| CX4g033946 | 4:17,399,297-17,403,479 | + | C1H4g03882 | C2H4g24793 | LOC_Os04g33780 | Os04g0414100 | - | Detail |
| CX4g034105 | 4:17,410,609-17,411,286 | + | C1H4g02836 | C2H4g26864 | LOC_Os04g33810 | Os04g0414300 | - | Detail |
| CX4g031934 | 4:17,412,491-17,413,234 | - | - | - | LOC_Os04g33820 | Os04g0414500 | - | Detail |
| CX4g031478 | 4:17,420,425-17,422,871 | + | C1H4g11612 | C2H4g04832 | LOC_Os04g33830 | Os04g0414700 | - | Detail |
| CX4g034312 | 4:17,424,602-17,426,239 | + | C1H4g14312 | C2H4g00501 | LOC_Os04g33840 | Os04g0414800 | - | Detail |
| CX4g035869 | 4:17,434,111-17,434,368 | + | C1H4g15358 | C2H4g04231 | LOC_Os04g33860 | Os04g0415000 | ACL1 | Detail |
| CX4g032373 | 4:17,434,513-17,434,815 | - | C1H4g11357 | C2H4g14107 | - | - | - | Detail |
| CX4g034163 | 4:17,443,559-17,444,687 | + | C1H4g00507 | C2H4g14689 | LOC_Os04g33870 | Os04g0415100 | - | Detail |
| CX4g033864 | 4:17,450,477-17,452,309 | + | C1H4g11437 | C2H4g24946 | LOC_Os04g33880 | Os04g0415200 | - | Detail |
| CX4g035015 | 4:17,456,638-17,457,528 | - | - | - | - | - | - | Detail |
| CX4g032762 | 4:17,463,405-17,464,016 | + | C1H4g17536 | C2H4g19861 | LOC_Os04g33920 | Os04g0415800 | - | Detail |
| CX4g031923 | 4:17,465,287-17,465,487 | - | - | - | - | - | - | Detail |
| CX4g034185 | 4:17,467,236-17,467,700 | + | C1H4g29189 | C2H4g09747 | LOC_Os04g33930 | Os04g0415800 | - | Detail |