| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g20357 | 1:6,740,887-6,746,050 | - | C2H1g04223 | CX1g000576 | LOC_Os01g13430 | Os01g0235400 | - | Detail |
| C1H1g30506 | 1:6,760,984-6,763,574 | - | C2H1g14983 | - | LOC_Os01g13450 | - | - | Detail |
| C1H1g11902 | 1:6,763,597-6,763,881 | - | C2H1g17455 | - | - | - | - | Detail |
| C1H1g16678 | 1:6,767,347-6,770,745 | - | C2H1g26489 | CX1g002030 | LOC_Os01g13460 | Os01g0235700 | - | Detail |
| C1H1g04852 | 1:6,781,466-6,787,053 | + | C2H1g26677 | CX1g003097 | LOC_Os01g13470 | Os01g0235800 | - | Detail |
| C1H1g15184 | 1:6,822,968-6,827,589 | + | C2H1g16495 | CX1g003128 | LOC_Os01g13520 | Os01g0236300 | - | Detail |
| C1H1g17637 | 1:6,835,205-6,837,876 | + | C2H1g14000 | CX1g003043 | LOC_Os01g13530 | Os01g0236400 | - | Detail |
| C1H1g25420 | 1:6,852,366-6,857,982 | + | C2H1g18150 | CX1g004637 | LOC_Os01g13540 | Os01g0236700 | OsNLP3 | Detail |
| C1H1g20768 | 1:6,859,452-6,863,523 | - | C2H1g16358 | CX1g000726 | LOC_Os01g13550 | Os01g0236800 | OsBAM4 | Detail |
| C1H1g28169 | 1:6,867,446-6,868,255 | + | C2H1g25091 | CX1g006099 | LOC_Os01g13560 | Os01g0237000 | - | Detail |
| C1H1g25294 | 1:6,869,495-6,871,558 | - | C2H1g06808 | CX1g006049 | LOC_Os01g13570 | Os01g0237100 | - | Detail |
| C1H1g15738 | 1:6,879,113-6,879,723 | - | C2H1g20221 | CX1g002255 | LOC_Os01g13590 | Os01g0237500 | - | Detail |
| C1H1g12456 | 1:6,889,370-6,890,790 | - | C2H1g05858 | CX1g002255 | LOC_Os01g13600 | Os01g0237366 | - | Detail |
| C1H1g04375 | 1:6,902,704-6,904,030 | - | C2H1g23166 | CX1g002255 | LOC_Os01g13610 | Os01g0237500 | - | Detail |
| C1H1g16280 | 1:6,905,886-6,906,374 | - | C2H1g03880 | CX1g002255 | LOC_Os01g13610 | Os01g0237750 | - | Detail |
| C1H1g15490 | 1:6,940,075-6,944,565 | + | C2H1g29940 | CX1g001232 | - | Os01g0238500 | - | Detail |
| C1H1g06012 | 1:6,946,713-6,948,936 | + | C2H1g16011 | CX1g001293 | LOC_Os01g13700 | Os01g0238600 | - | Detail |
| C1H1g16153 | 1:6,949,540-6,953,098 | + | C2H1g06720 | CX1g002247 | LOC_Os01g13710 | Os01g0238700 | - | Detail |
| C1H1g01876 | 1:6,953,181-6,955,141 | - | C2H1g21258 | CX1g007018 | LOC_Os01g13720 | Os01g0238800 | - | Detail |
| C1H1g07228 | 1:6,955,143-6,955,346 | - | C2H1g25981 | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g034076 | 4:17,347,092-17,347,565 | - | C1H5g19097 | C2H2g02746 | - | - | - | Detail |
| CX4g032656 | 4:17,349,663-17,353,902 | - | C1H4g11558 | C2H4g17905 | LOC_Os04g33700 | Os04g0413000 | - | Detail |
| CX4g032780 | 4:17,355,767-17,356,387 | - | - | - | LOC_Os04g33710 | Os04g0413100 | - | Detail |
| CX4g033899 | 4:17,356,851-17,359,245 | + | C1H4g19570 | C2H4g06805 | LOC_Os04g33720 | Os04g0413200 | OsCIN3 | Detail |
| CX4g035303 | 4:17,364,048-17,369,240 | + | C1H4g06839 | C2H4g13973 | LOC_Os04g33740 | Os04g0413500 | GIF1, gif1, CIN2, OsCIN2, OsGIF1, WB1 | Detail |
| CX4g031965 | 4:17,387,179-17,387,928 | + | - | C2H4g20318 | LOC_Os04g33760 | Os04g0413900 | OsS40-6 | Detail |
| CX4g031791 | 4:17,391,751-17,395,712 | + | C1H4g19252 | C2H4g25683 | LOC_Os04g33770 | Os04g0414000 | - | Detail |
| CX4g033946 | 4:17,399,297-17,403,479 | + | C1H4g03882 | C2H4g24793 | LOC_Os04g33780 | Os04g0414100 | - | Detail |
| CX4g034105 | 4:17,410,609-17,411,286 | + | C1H4g02836 | C2H4g26864 | LOC_Os04g33810 | Os04g0414300 | - | Detail |
| CX4g031934 | 4:17,412,491-17,413,234 | - | - | - | LOC_Os04g33820 | Os04g0414500 | - | Detail |
| CX4g031478 | 4:17,420,425-17,422,871 | + | C1H4g11612 | C2H4g04832 | LOC_Os04g33830 | Os04g0414700 | - | Detail |
| CX4g034312 | 4:17,424,602-17,426,239 | + | C1H4g14312 | C2H4g00501 | LOC_Os04g33840 | Os04g0414800 | - | Detail |
| CX4g035869 | 4:17,434,111-17,434,368 | + | C1H4g15358 | C2H4g04231 | LOC_Os04g33860 | Os04g0415000 | ACL1 | Detail |
| CX4g032373 | 4:17,434,513-17,434,815 | - | C1H4g11357 | C2H4g14107 | - | - | - | Detail |
| CX4g034163 | 4:17,443,559-17,444,687 | + | C1H4g00507 | C2H4g14689 | LOC_Os04g33870 | Os04g0415100 | - | Detail |
| CX4g033864 | 4:17,450,477-17,452,309 | + | C1H4g11437 | C2H4g24946 | LOC_Os04g33880 | Os04g0415200 | - | Detail |
| CX4g035015 | 4:17,456,638-17,457,528 | - | - | - | - | - | - | Detail |
| CX4g032762 | 4:17,463,405-17,464,016 | + | C1H4g17536 | C2H4g19861 | LOC_Os04g33920 | Os04g0415800 | - | Detail |
| CX4g031923 | 4:17,465,287-17,465,487 | - | - | - | - | - | - | Detail |
| CX4g034185 | 4:17,467,236-17,467,700 | + | C1H4g29189 | C2H4g09747 | LOC_Os04g33930 | Os04g0415800 | - | Detail |