| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g08416 | 1:27,925,685-27,929,922 | + | C1H1g06199 | CX1g005528 | LOC_Os01g54515 | Os01g0748950 | OsNPF4.5 | Detail |
| C2H1g22814 | 1:27,930,437-27,931,290 | + | C1H1g21519 | CX1g000885 | LOC_Os01g54520 | Os01g0749000 | - | Detail |
| C2H1g20660 | 1:27,932,265-27,934,722 | + | C1H1g06931 | CX1g004193 | LOC_Os01g54530 | Os01g0749100 | - | Detail |
| C2H1g21635 | 1:27,935,519-27,937,890 | + | C1H1g02075 | CX1g000277 | LOC_Os01g54540 | Os01g0749200 | WLP1, cp rpl13, cp RPL13 | Detail |
| C2H1g02265 | 1:27,938,809-27,941,059 | + | C1H1g00896 | CX1g005465 | LOC_Os01g54550 | Os01g0749300 | HSFA4A, OsHsfA4a, OsHsfA4b, OsHsf-04, HSFA4B, HSF04, OsHSF9, RHSF9, HSF9 | Detail |
| C2H1g14114 | 1:27,942,037-27,946,129 | - | C1H1g09179 | CX1g003457 | LOC_Os01g54560 | Os01g0749400 | - | Detail |
| C2H1g10922 | 1:27,965,504-27,970,673 | + | C1H1g19262 | CX1g003630 | LOC_Os01g54580 | Os01g0749900 | - | Detail |
| C2H1g29233 | 1:27,974,220-27,977,908 | + | C1H1g17809 | CX1g000465 | LOC_Os01g54590 | Os01g0750000 | - | Detail |
| C2H1g09211 | 1:27,980,401-27,982,082 | - | C1H1g24495 | CX1g004996 | LOC_Os01g54600 | Os01g0750100 | WRKY13, OsWRKY13 | Detail |
| C2H1g25863 | 1:27,992,124-27,997,821 | + | C1H1g00277 | CX1g006527 | LOC_Os01g54620 | Os01g0750300 | - | Detail |
| C2H1g29243 | 1:28,006,149-28,009,921 | - | C1H1g12537 | - | LOC_Os01g54670 | Os01g0750500 | - | Detail |
| C2H1g03544 | 1:28,014,717-28,018,126 | - | C1H1g02730 | CX1g001248 | LOC_Os01g54700 | Os01g0750600 | - | Detail |
| C2H1g05225 | 1:28,029,339-28,029,912 | - | C1H1g08638 | CX1g000813 | LOC_Os01g53140 | Os01g0750800 | - | Detail |
| C2H1g04914 | 1:28,043,850-28,051,886 | + | C1H1g18828 | CX1g006345 | LOC_Os01g54784 | Os01g0751300 | - | Detail |
| C2H1g10063 | 1:28,056,456-28,059,326 | - | C1H1g01340 | CX1g003213 | LOC_Os01g54810 | Os01g0751600 | THIS1, This1 | Detail |
| C2H1g08663 | 1:28,061,852-28,063,890 | + | C1H1g28508 | CX1g001241 | LOC_Os01g54850 | Os01g0752100 | - | Detail |
| C2H1g27818 | 1:28,064,022-28,068,139 | - | C1H1g19975 | CX1g002849 | LOC_Os01g54860 | Os01g0752200 | NOG1 | Detail |
| C2H1g21432 | 1:28,070,490-28,072,113 | - | C1H1g04449 | CX1g004206 | LOC_Os01g54870 | Os01g0752300 | - | Detail |
| C2H1g04122 | 1:28,073,615-28,076,043 | - | C1H1g25368 | CX1g006705 | LOC_Os01g54880 | Os01g0752400 | - | Detail |
| C2H1g02082 | 1:28,080,846-28,086,760 | - | C1H1g06182 | CX1g007206 | LOC_Os01g54900 | Os01g0752600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g032352 | 4:17,186,348-17,191,405 | + | C1H4g14413 | C2H4g17999 | LOC_Os04g33480 | Os04g0409600 | DSL1, OsHDA711 | Detail |
| CX4g032016 | 4:17,192,302-17,195,047 | + | C1H4g17013 | C2H4g14351 | LOC_Os04g33490 | Os04g0409900 | - | Detail |
| CX4g034768 | 4:17,195,245-17,198,475 | - | C1H4g22622 | C2H4g05689 | LOC_Os04g33500 | Os04g0410200 | - | Detail |
| CX4g031458 | 4:17,211,820-17,213,927 | + | C1H4g23649 | C2H4g27427 | LOC_Os04g33510 | Os04g0410300 | - | Detail |
| CX4g034502 | 4:17,215,247-17,216,318 | + | C1H4g05147 | C2H4g01491 | LOC_Os04g33520 | Os04g0410400 | - | Detail |
| CX4g032279 | 4:17,218,423-17,220,059 | - | C1H4g28526 | C2H4g29020 | LOC_Os04g33530 | Os04g0410600 | - | Detail |
| CX4g031887 | 4:17,220,807-17,221,358 | - | - | - | - | - | - | Detail |
| CX4g035834 | 4:17,238,105-17,238,404 | + | C1H4g13967 | C2H4g19013 | LOC_Os04g33560 | Os04g0411200 | - | Detail |
| CX4g035203 | 4:17,241,859-17,242,284 | + | C1H4g02095 | C2H4g14818 | - | - | - | Detail |
| CX4g034096 | 4:17,251,784-17,253,309 | - | C1H4g06511 | C2H4g06840 | LOC_Os04g33570 | Os04g0411400 | RCN4 | Detail |
| CX4g034955 | 4:17,262,685-17,263,267 | + | C1H4g09558 | C2H4g18934 | LOC_Os04g30940 | - | - | Detail |
| CX4g034692 | 4:17,279,002-17,284,210 | + | C1H4g04480 | C2H4g18183 | LOC_Os04g33590 | Os04g0411800 | - | Detail |
| CX4g035360 | 4:17,286,674-17,291,444 | + | C1H4g04480 | C2H4g17971 | LOC_Os04g33600 | Os04g0411800 | - | Detail |
| CX4g035334 | 4:17,299,026-17,299,649 | + | C1H4g02994 | C2H4g01788 | LOC_Os04g33610 | Os04g0412100 | OsBIC1 | Detail |
| CX4g033895 | 4:17,306,941-17,307,399 | + | C1H4g08221 | C2H4g00589 | LOC_Os04g33630 | Os04g0412200 | - | Detail |
| CX4g031818 | 4:17,312,156-17,318,008 | + | C1H4g31611 | C2H4g24079 | LOC_Os04g33640 | Os04g0412300 | - | Detail |
| CX4g035419 | 4:17,326,119-17,327,661 | + | C1H4g08556 | C2H4g24079 | LOC_Os04g33660 | Os04g0412500 | - | Detail |
| CX4g034454 | 4:17,336,313-17,337,659 | + | - | C2H4g11928 | LOC_Os04g33680 | Os04g0412800 | - | Detail |
| CX4g032099 | 4:17,339,124-17,339,285 | + | - | - | - | - | - | Detail |
| CX4g035285 | 4:17,339,747-17,349,045 | + | C1H4g15980 | C2H4g27573 | LOC_Os04g33690 | Os04g0412900 | - | Detail |