| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g12434 | 5:17,908,515-17,909,033 | - | C2H5g12625 | CX5g039543 | LOC_Os01g63800 | Os05g0447000 | - | Detail |
| C1H5g27944 | 5:17,914,383-17,920,136 | - | C2H5g25449 | CX5g036820 | LOC_Os05g37470 | Os05g0447200 | - | Detail |
| C1H5g12420 | 5:17,930,866-17,947,371 | - | C2H5g25292 | CX5g036851 | LOC_Os05g37500 | Os05g0447580 | - | Detail |
| C1H5g24273 | 5:17,951,935-17,953,651 | - | C2H5g15162 | CX5g040386 | LOC_Os05g37520 | Os05g0447700 | - | Detail |
| C1H5g03822 | 5:17,965,997-17,970,066 | + | C2H5g11261 | CX5g039030 | LOC_Os05g37600 | Os05g0448300 | - | Detail |
| C1H5g28240 | 5:17,983,558-17,984,565 | + | C2H5g08320 | CX5g039241 | LOC_Os05g37640 | Os05g0448675 | - | Detail |
| C1H5g23210 | 5:17,985,368-17,988,998 | - | C2H5g04056 | CX5g040111 | LOC_Os05g37660 | Os05g0449200 | - | Detail |
| C1H5g08417 | 5:18,002,067-18,005,035 | + | C2H5g04693 | CX5g037128 | LOC_Os05g37690 | Os05g0449500 | OsCOI1b, OsCOI1H, OsFbox260, Os_F0646 | Detail |
| C1H5g11760 | 5:18,007,705-18,008,679 | - | - | - | - | - | - | Detail |
| C1H5g01253 | 5:18,013,707-18,018,179 | + | C2H5g26890 | CX5g040292 | LOC_Os05g37700 | Os05g0449600 | - | Detail |
| C1H5g19157 | 5:18,027,523-18,028,593 | - | C2H5g03693 | CX5g037176 | LOC_Os05g37730 | Os05g0449900 | Os2R_MYB57 | Detail |
| C1H5g14659 | 5:18,054,743-18,055,554 | + | C2H5g27025 | CX5g037869 | LOC_Os05g37780 | Os05g0450300 | - | Detail |
| C1H5g01767 | 5:18,070,624-18,072,612 | + | C2H5g25395 | CX5g039495 | LOC_Os05g37800 | Os05g0450600 | - | Detail |
| C1H5g07138 | 5:18,084,762-18,088,447 | + | C2H5g19098 | CX5g038272 | LOC_Os05g37820 | Os05g0451100 | OsPHT4;2 | Detail |
| C1H5g30639 | 5:18,088,988-18,091,070 | - | C2H5g23791 | CX5g039929 | LOC_Os05g37830 | Os05g0451300 | - | Detail |
| C1H5g02168 | 5:18,102,688-18,106,650 | + | C2H5g16211 | CX5g038310 | LOC_Os05g37880 | Os05g0451900 | - | Detail |
| C1H5g16782 | 5:18,125,599-18,129,272 | + | C2H5g20030 | CX5g039202 | LOC_Os05g37900 | Os05g0452800 | - | Detail |
| C1H5g18778 | 5:18,136,424-18,140,608 | - | C2H5g10306 | CX5g037978 | LOC_Os05g37910 | Os05g0452900 | OsIPCS2 | Detail |
| C1H5g17967 | 5:18,160,153-18,162,777 | - | C2H5g09041 | CX5g039197 | LOC_Os05g37930 | Os05g0453300 | - | Detail |
| C1H5g08818 | 5:18,182,239-18,186,111 | - | C2H5g15966 | CX5g040447 | LOC_Os05g37950 | Os05g0453500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g032352 | 4:17,186,348-17,191,405 | + | C1H4g14413 | C2H4g17999 | LOC_Os04g33480 | Os04g0409600 | DSL1, OsHDA711 | Detail |
| CX4g032016 | 4:17,192,302-17,195,047 | + | C1H4g17013 | C2H4g14351 | LOC_Os04g33490 | Os04g0409900 | - | Detail |
| CX4g034768 | 4:17,195,245-17,198,475 | - | C1H4g22622 | C2H4g05689 | LOC_Os04g33500 | Os04g0410200 | - | Detail |
| CX4g031458 | 4:17,211,820-17,213,927 | + | C1H4g23649 | C2H4g27427 | LOC_Os04g33510 | Os04g0410300 | - | Detail |
| CX4g034502 | 4:17,215,247-17,216,318 | + | C1H4g05147 | C2H4g01491 | LOC_Os04g33520 | Os04g0410400 | - | Detail |
| CX4g032279 | 4:17,218,423-17,220,059 | - | C1H4g28526 | C2H4g29020 | LOC_Os04g33530 | Os04g0410600 | - | Detail |
| CX4g031887 | 4:17,220,807-17,221,358 | - | - | - | - | - | - | Detail |
| CX4g035834 | 4:17,238,105-17,238,404 | + | C1H4g13967 | C2H4g19013 | LOC_Os04g33560 | Os04g0411200 | - | Detail |
| CX4g035203 | 4:17,241,859-17,242,284 | + | C1H4g02095 | C2H4g14818 | - | - | - | Detail |
| CX4g034096 | 4:17,251,784-17,253,309 | - | C1H4g06511 | C2H4g06840 | LOC_Os04g33570 | Os04g0411400 | RCN4 | Detail |
| CX4g034955 | 4:17,262,685-17,263,267 | + | C1H4g09558 | C2H4g18934 | LOC_Os04g30940 | - | - | Detail |
| CX4g034692 | 4:17,279,002-17,284,210 | + | C1H4g04480 | C2H4g18183 | LOC_Os04g33590 | Os04g0411800 | - | Detail |
| CX4g035360 | 4:17,286,674-17,291,444 | + | C1H4g04480 | C2H4g17971 | LOC_Os04g33600 | Os04g0411800 | - | Detail |
| CX4g035334 | 4:17,299,026-17,299,649 | + | C1H4g02994 | C2H4g01788 | LOC_Os04g33610 | Os04g0412100 | OsBIC1 | Detail |
| CX4g033895 | 4:17,306,941-17,307,399 | + | C1H4g08221 | C2H4g00589 | LOC_Os04g33630 | Os04g0412200 | - | Detail |
| CX4g031818 | 4:17,312,156-17,318,008 | + | C1H4g31611 | C2H4g24079 | LOC_Os04g33640 | Os04g0412300 | - | Detail |
| CX4g035419 | 4:17,326,119-17,327,661 | + | C1H4g08556 | C2H4g24079 | LOC_Os04g33660 | Os04g0412500 | - | Detail |
| CX4g034454 | 4:17,336,313-17,337,659 | + | - | C2H4g11928 | LOC_Os04g33680 | Os04g0412800 | - | Detail |
| CX4g032099 | 4:17,339,124-17,339,285 | + | - | - | - | - | - | Detail |
| CX4g035285 | 4:17,339,747-17,349,045 | + | C1H4g15980 | C2H4g27573 | LOC_Os04g33690 | Os04g0412900 | - | Detail |