| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g20333 | 6:23,554,310-23,555,618 | + | C2H6g19745 | CX6g045501 | LOC_Os06g44900 | Os06g0659400 | - | Detail |
| C1H6g30421 | 6:23,556,586-23,558,799 | + | C2H6g17624 | CX6g042165 | LOC_Os06g44910 | Os06g0659500 | - | Detail |
| C1H6g23103 | 6:23,564,657-23,564,998 | - | - | - | - | - | - | Detail |
| C1H6g05245 | 6:23,565,032-23,566,135 | - | - | - | - | Os06g0659600 | - | Detail |
| C1H6g28818 | 6:23,572,502-23,572,972 | - | - | CX6g043921 | LOC_Os06g44930 | Os06g0659800 | - | Detail |
| C1H6g30289 | 6:23,593,802-23,597,273 | + | C2H6g29145 | CX6g043417 | LOC_Os06g44970 | Os06g0660200 | OsPIN2, PIN2 | Detail |
| C1H6g03713 | 6:23,602,801-23,603,007 | - | - | CX6g042752 | LOC_Os06g44980 | Os06g0660400 | - | Detail |
| C1H6g10775 | 6:23,606,289-23,610,695 | + | C2H6g26561 | CX6g042267 | LOC_Os06g45000 | Os06g0660700 | - | Detail |
| C1H6g30897 | 6:23,613,912-23,620,492 | + | C2H6g03279 | CX6g042767 | LOC_Os06g45020 | Os06g0660800 | - | Detail |
| C1H6g23868 | 6:23,627,158-23,627,886 | + | C2H6g19072 | CX6g043493 | LOC_Os06g45040 | Os06g0661200 | - | Detail |
| C1H6g04237 | 6:23,631,297-23,632,266 | - | C2H6g19984 | CX6g043377 | - | - | - | Detail |
| C1H6g05211 | 6:23,633,734-23,633,961 | - | - | CX6g042698 | - | - | - | Detail |
| C1H6g27462 | 6:23,634,101-23,637,719 | + | C2H6g15814 | CX6g044438 | LOC_Os06g45050 | Os06g0661400 | - | Detail |
| C1H6g20860 | 6:23,638,176-23,639,127 | - | C2H6g03533 | CX6g043401 | LOC_Os06g45060 | Os06g0661500 | - | Detail |
| C1H6g12888 | 6:23,639,514-23,639,759 | + | - | CX6g042755 | LOC_Os06g45070 | Os06g0661600 | - | Detail |
| C1H6g10184 | 6:23,641,750-23,646,183 | - | C2H6g07549 | CX6g042847 | LOC_Os06g45080 | Os06g0661700 | - | Detail |
| C1H6g11026 | 6:23,649,729-23,650,645 | + | C2H6g01023 | CX6g044489 | LOC_Os06g45090 | Os06g0661766 | - | Detail |
| C1H6g25522 | 6:23,651,373-23,654,571 | - | C2H6g03075 | CX6g042632 | LOC_Os06g45100 | Os06g0661800 | - | Detail |
| C1H6g23408 | 6:23,655,485-23,660,585 | - | C2H6g29640 | CX6g045877 | LOC_Os06g45110 | Os06g0661900 | - | Detail |
| C1H6g23397 | 6:23,661,871-23,668,485 | - | C2H6g27870 | CX6g045100 | LOC_Os06g45120 | Os06g0662000 | PLS1, OsVHA-A, VHAA1, VHA-A1, OsPLS1, OsPLS1/VHA-A1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g035592 | 4:16,848,997-16,850,026 | - | C1H4g15778 | C2H4g06982 | LOC_Os04g32980 | Os04g0402500 | - | Detail |
| CX4g034740 | 4:16,864,339-16,864,599 | + | - | - | - | - | - | Detail |
| CX4g036153 | 4:16,923,579-16,924,800 | + | C1H4g07240 | C2H4g06461 | LOC_Os04g33030 | Os04g0403200 | - | Detail |
| CX4g032340 | 4:16,932,939-16,933,088 | - | - | - | - | Os07g0616100 | - | Detail |
| CX4g034608 | 4:16,935,063-16,938,273 | + | C1H4g07835 | C2H4g07757 | LOC_Os04g33040 | Os04g0403300 | - | Detail |
| CX4g034506 | 4:16,938,939-16,944,055 | + | C1H4g10687 | C2H4g27026 | LOC_Os04g33050 | Os04g0403400 | - | Detail |
| CX4g033005 | 4:16,944,575-16,948,129 | + | C1H4g21762 | C2H4g06142 | LOC_Os04g33060 | Os04g0403500 | - | Detail |
| CX4g035628 | 4:16,948,887-16,949,156 | - | - | - | LOC_Os04g33070 | Os04g0403600 | - | Detail |
| CX4g036347 | 4:16,950,366-16,952,322 | - | C1H4g16707 | C2H4g05650 | LOC_Os04g33080 | Os04g0403701 | - | Detail |
| CX4g033168 | 4:16,973,231-16,973,413 | + | - | - | - | - | - | Detail |
| CX4g031400 | 4:16,978,709-16,979,414 | - | C1H4g29160 | C2H4g08188 | LOC_Os04g33110 | Os04g0403900 | - | Detail |
| CX4g034858 | 4:16,980,028-16,980,387 | + | - | - | LOC_Os04g33115 | Os04g0404000 | - | Detail |
| CX4g033687 | 4:16,983,353-16,983,918 | - | C1H4g22277 | C2H4g05726 | - | - | - | Detail |
| CX4g033625 | 4:16,997,678-16,997,965 | - | - | - | - | - | - | Detail |
| CX4g032114 | 4:17,000,210-17,001,367 | - | C1H4g01070 | C2H4g02595 | LOC_Os04g33150 | Os04g0404400 | TRD4.2 | Detail |
| CX4g035122 | 4:17,013,852-17,018,558 | + | C1H4g19552 | C2H4g12964 | LOC_Os04g33190 | Os04g0404800 | - | Detail |
| CX4g034399 | 4:17,019,681-17,027,658 | - | C1H4g09341 | C2H4g17158 | LOC_Os04g33200 | Os04g0404900 | - | Detail |
| CX4g033654 | 4:17,029,627-17,030,130 | + | - | C2H4g01071 | - | Os04g0496300 | - | Detail |
| CX4g034889 | 4:17,033,009-17,038,198 | + | C1H4g00203 | C2H4g18122 | LOC_Os04g33210 | Os04g0405000 | - | Detail |
| CX4g033742 | 4:17,038,977-17,041,653 | - | C1H4g26027 | C2H4g07819 | LOC_Os04g33220 | Os04g0405100 | - | Detail |