| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g09691 | 4:26,580,711-26,584,445 | + | C1H4g14177 | CX4g033376 | LOC_Os04g52130 | Os04g0610800 | RLIN1, LLM1 | Detail |
| C2H4g11372 | 4:26,592,973-26,598,234 | + | C1H4g09163 | CX4g036098 | LOC_Os04g52140 | Os04g0610900 | - | Detail |
| C2H4g01714 | 4:26,599,431-26,599,788 | - | C1H4g23425 | - | - | - | - | Detail |
| C2H4g26244 | 4:26,608,374-26,611,850 | + | C1H4g04249 | CX4g036457 | LOC_Os04g52164 | Os04g0611200 | OsCER2, CER2 | Detail |
| C2H4g08391 | 4:26,612,604-26,614,002 | + | C1H4g10872 | CX4g036475 | LOC_Os04g52180 | Os04g0611300 | - | Detail |
| C2H4g02094 | 4:26,615,862-26,619,562 | + | C1H4g27242 | CX4g034440 | LOC_Os04g52190 | Os04g0611400 | OsVSR7 | Detail |
| C2H4g06949 | 4:26,619,463-26,625,917 | - | C1H4g09397 | CX4g034242 | LOC_Os04g52200 | Os04g0611500 | - | Detail |
| C2H4g00671 | 4:26,630,076-26,634,745 | + | C1H4g09771 | CX4g033691 | LOC_Os04g52230 | Os04g0611800 | OsKSL2 | Detail |
| C2H4g15117 | 4:26,655,250-26,661,059 | + | C1H4g22925 | CX4g032176 | LOC_Os04g52240 | Os04g0612000 | KS2, OsKS2, KS2, KSL2, OsKSL2, OsTPS27, OsKSL5 | Detail |
| C2H4g26250 | 4:26,662,537-26,663,765 | - | C1H4g18596 | CX4g035138 | LOC_Os04g58555 | Os04g0612100 | - | Detail |
| C2H4g02839 | 4:26,674,749-26,675,429 | + | C1H4g22025 | CX4g036089 | LOC_Os04g35020 | Os04g0429500 | OsCSLH2 | Detail |
| C2H4g23617 | 4:26,677,520-26,677,987 | + | C1H4g29756 | CX4g031769 | LOC_Os04g52260 | Os04g0612500 | OsHyPRP16 | Detail |
| C2H4g26765 | 4:26,679,506-26,684,605 | - | C1H4g23379 | CX4g032492 | LOC_Os04g52270 | Os04g0612600 | - | Detail |
| C2H4g08408 | 4:26,686,364-26,689,958 | + | C1H4g22616 | CX4g036512 | LOC_Os04g52280 | Os04g0612700 | FC1, OsCAD7 | Detail |
| C2H4g11392 | 4:26,690,347-26,692,701 | - | C1H4g13487 | CX4g033473 | LOC_Os04g52290 | Os04g0612800 | - | Detail |
| C2H4g06866 | 4:26,693,576-26,693,998 | + | C1H4g23018 | CX4g035500 | LOC_Os04g52300 | Os04g0612900 | - | Detail |
| C2H4g30388 | 4:26,694,560-26,696,779 | - | C1H4g19703 | CX4g036361 | LOC_Os04g52310 | Os04g0613000 | ZIP3, OsZIP3 | Detail |
| C2H4g14538 | 4:26,704,186-26,707,913 | + | C1H4g25868 | CX4g032554 | LOC_Os04g52320 | Os04g0613200 | - | Detail |
| C2H4g16426 | 4:26,709,781-26,712,495 | - | C1H4g13224 | CX4g033530 | LOC_Os04g52330 | Os04g0613300 | - | Detail |
| C2H4g12813 | 4:26,713,796-26,718,593 | - | C1H4g01801 | CX4g033988 | LOC_Os04g52340 | Os04g0613400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g007140 | 1:19,541,738-19,551,510 | - | C1H1g16258 | C2H1g08516 | LOC_Os01g38910 | Os01g0568800 | Gnk2-K1 | Detail |
| CX1g005732 | 1:19,589,667-19,594,035 | + | C1H1g21031 | C2H1g24947 | LOC_Os01g38950 | Os01g0570500 | - | Detail |
| CX1g006869 | 1:19,597,538-19,598,449 | - | C1H1g03105 | C2H1g24876 | LOC_Os01g38960 | Os01g0570601 | - | Detail |
| CX1g003697 | 1:19,603,221-19,608,015 | + | C1H1g16555 | C2H1g10120 | LOC_Os01g38970 | Os01g0570700 | - | Detail |
| CX1g004643 | 1:19,610,625-19,612,827 | - | C1H1g05272 | C2H1g26639 | LOC_Os01g38980 | Os01g0570800 | OsIQM1 | Detail |
| CX1g003765 | 1:19,634,197-19,634,364 | - | - | - | - | - | - | Detail |
| CX1g006688 | 1:19,636,456-19,636,608 | - | - | - | - | - | - | Detail |
| CX1g004950 | 1:19,639,242-19,641,683 | + | C1H1g12320 | C2H1g11902 | LOC_Os01g38990 | Os01g0571000 | - | Detail |
| CX1g002465 | 1:19,642,667-19,647,394 | - | C1H1g21409 | C2H1g27305 | LOC_Os01g39000 | Os01g0571100 | - | Detail |
| CX1g006736 | 1:19,653,685-19,656,099 | + | C1H1g07390 | C2H1g14300 | LOC_Os01g39010 | Os01g0571200 | - | Detail |
| CX1g004092 | 1:19,659,146-19,661,769 | + | C1H1g19692 | C2H1g16893 | LOC_Os01g39020 | Os01g0571300 | OsHsfA7 | Detail |
| CX1g005574 | 1:19,662,790-19,666,491 | + | C1H1g17261 | C2H1g12280 | LOC_Os01g39100 | Os01g0572100 | - | Detail |
| CX1g001024 | 1:19,682,794-19,685,768 | + | C1H1g04588 | C2H1g16877 | LOC_Os01g39110 | Os01g0572300 | - | Detail |
| CX1g004353 | 1:19,719,312-19,724,577 | - | C1H1g13150 | C2H1g07054 | LOC_Os01g39134 | Os01g0572700 | - | Detail |
| CX1g004042 | 1:19,758,467-19,763,918 | + | C1H1g29752 | C2H1g10171 | LOC_Os01g39260 | Os01g0574500 | - | Detail |
| CX1g006116 | 1:19,764,553-19,767,126 | - | C1H1g31440 | C2H1g01556 | LOC_Os01g39270 | Os01g0574600 | OsGR2, GLYR2 | Detail |
| CX1g001219 | 1:19,774,748-19,775,722 | + | - | - | - | - | - | Detail |
| CX1g005853 | 1:19,805,101-19,813,023 | + | C1H1g25426 | C2H1g03847 | LOC_Os01g39310 | Os01g0575000 | - | Detail |
| CX1g001020 | 1:19,821,137-19,821,298 | - | - | - | - | - | - | Detail |
| CX1g007231 | 1:19,824,449-19,828,149 | + | C1H1g10200 | C2H1g02368 | LOC_Os01g39330 | Os01g0575200 | OsbHLH024 | Detail |