| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g27162 | 9:19,021,887-19,023,725 | - | C1H9g18815 | CX9g057033 | LOC_Os09g38920 | Os09g0497500 | - | Detail |
| C2H9g03456 | 9:19,024,895-19,026,937 | - | C1H9g04134 | CX9g057411 | LOC_Os09g38930 | Os09g0562750 | - | Detail |
| C2H9g09986 | 9:19,040,180-19,040,616 | + | C1H9g07046 | CX9g055362 | LOC_Os09g38670 | Os09g0559600 | - | Detail |
| C2H9g06709 | 9:19,042,621-19,048,413 | - | C1H9g06523 | CX9g055046 | LOC_Os09g38960 | Os09g0563200 | OsHAK18 | Detail |
| C2H9g01538 | 9:19,051,561-19,057,154 | + | C1H9g19754 | CX9g057500 | LOC_Os09g38970 | Os09g0563250 | - | Detail |
| C2H9g16021 | 9:19,057,688-19,061,764 | + | C1H9g21219 | CX9g054934 | LOC_Os09g38980 | Os09g0563300 | TCD9, OsCPn60alpha3, OsCPn60α3 | Detail |
| C2H9g21433 | 9:19,071,960-19,074,845 | + | C1H9g01697 | CX9g056918 | LOC_Os09g39020 | Os09g0563700 | - | Detail |
| C2H9g26806 | 9:19,076,762-19,086,439 | - | C1H9g21274 | CX9g057338 | LOC_Os09g39034 | Os09g0563800 | - | Detail |
| C2H9g27013 | 9:19,092,614-19,094,426 | - | C1H9g07375 | CX9g058103 | LOC_Os09g39060 | Os09g0564000 | - | Detail |
| C2H9g21279 | 9:19,098,085-19,100,923 | - | C1H9g22045 | CX9g058103 | LOC_Os09g39070 | Os09g0564200 | - | Detail |
| C2H9g23865 | 9:19,108,617-19,110,153 | - | C1H9g22045 | CX9g058103 | LOC_Os09g39090 | Os09g0564400 | - | Detail |
| C2H9g13270 | 9:19,121,816-19,124,616 | - | C1H9g22045 | CX9g058103 | LOC_Os09g39110 | Os09g0564600 | - | Detail |
| C2H9g00317 | 9:19,126,925-19,128,682 | - | C1H9g27358 | CX9g058103 | LOC_Os09g39120 | Os09g0564700 | - | Detail |
| C2H9g01274 | 9:19,137,269-19,139,208 | - | C1H9g06269 | CX9g058103 | LOC_Os09g39160 | Os09g0565000 | - | Detail |
| C2H9g29707 | 9:19,176,003-19,178,915 | + | C1H9g06269 | CX9g058103 | LOC_Os09g39160 | Os09g0565000 | - | Detail |
| C2H9g17980 | 9:19,186,630-19,189,149 | - | C1H9g03665 | CX9g055784 | LOC_Os09g39180 | Os09g0565200 | OsCRP1 | Detail |
| C2H9g06735 | 9:19,189,868-19,191,873 | - | C1H9g23294 | CX9g055878 | LOC_Os09g39190 | Os09g0565300 | - | Detail |
| C2H9g05243 | 9:19,193,569-19,195,287 | - | C1H9g02800 | CX9g055878 | LOC_Os09g39190 | Os09g0565350 | - | Detail |
| C2H9g29461 | 9:19,195,507-19,199,219 | - | C1H9g15519 | CX9g056354 | LOC_Os09g39200 | Os09g0565400 | - | Detail |
| C2H9g27919 | 9:19,201,190-19,217,268 | + | C1H9g26476 | CX9g057714 | - | Os09g0565500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g007140 | 1:19,541,738-19,551,510 | - | C1H1g16258 | C2H1g08516 | LOC_Os01g38910 | Os01g0568800 | Gnk2-K1 | Detail |
| CX1g005732 | 1:19,589,667-19,594,035 | + | C1H1g21031 | C2H1g24947 | LOC_Os01g38950 | Os01g0570500 | - | Detail |
| CX1g006869 | 1:19,597,538-19,598,449 | - | C1H1g03105 | C2H1g24876 | LOC_Os01g38960 | Os01g0570601 | - | Detail |
| CX1g003697 | 1:19,603,221-19,608,015 | + | C1H1g16555 | C2H1g10120 | LOC_Os01g38970 | Os01g0570700 | - | Detail |
| CX1g004643 | 1:19,610,625-19,612,827 | - | C1H1g05272 | C2H1g26639 | LOC_Os01g38980 | Os01g0570800 | OsIQM1 | Detail |
| CX1g003765 | 1:19,634,197-19,634,364 | - | - | - | - | - | - | Detail |
| CX1g006688 | 1:19,636,456-19,636,608 | - | - | - | - | - | - | Detail |
| CX1g004950 | 1:19,639,242-19,641,683 | + | C1H1g12320 | C2H1g11902 | LOC_Os01g38990 | Os01g0571000 | - | Detail |
| CX1g002465 | 1:19,642,667-19,647,394 | - | C1H1g21409 | C2H1g27305 | LOC_Os01g39000 | Os01g0571100 | - | Detail |
| CX1g006736 | 1:19,653,685-19,656,099 | + | C1H1g07390 | C2H1g14300 | LOC_Os01g39010 | Os01g0571200 | - | Detail |
| CX1g004092 | 1:19,659,146-19,661,769 | + | C1H1g19692 | C2H1g16893 | LOC_Os01g39020 | Os01g0571300 | OsHsfA7 | Detail |
| CX1g005574 | 1:19,662,790-19,666,491 | + | C1H1g17261 | C2H1g12280 | LOC_Os01g39100 | Os01g0572100 | - | Detail |
| CX1g001024 | 1:19,682,794-19,685,768 | + | C1H1g04588 | C2H1g16877 | LOC_Os01g39110 | Os01g0572300 | - | Detail |
| CX1g004353 | 1:19,719,312-19,724,577 | - | C1H1g13150 | C2H1g07054 | LOC_Os01g39134 | Os01g0572700 | - | Detail |
| CX1g004042 | 1:19,758,467-19,763,918 | + | C1H1g29752 | C2H1g10171 | LOC_Os01g39260 | Os01g0574500 | - | Detail |
| CX1g006116 | 1:19,764,553-19,767,126 | - | C1H1g31440 | C2H1g01556 | LOC_Os01g39270 | Os01g0574600 | OsGR2, GLYR2 | Detail |
| CX1g001219 | 1:19,774,748-19,775,722 | + | - | - | - | - | - | Detail |
| CX1g005853 | 1:19,805,101-19,813,023 | + | C1H1g25426 | C2H1g03847 | LOC_Os01g39310 | Os01g0575000 | - | Detail |
| CX1g001020 | 1:19,821,137-19,821,298 | - | - | - | - | - | - | Detail |
| CX1g007231 | 1:19,824,449-19,828,149 | + | C1H1g10200 | C2H1g02368 | LOC_Os01g39330 | Os01g0575200 | OsbHLH024 | Detail |