| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g16516 | 9:18,781,081-18,784,060 | - | C2H9g11187 | CX9g056989 | LOC_Os09g38750 | Os09g0560400 | - | Detail |
| C1H9g03926 | 9:18,784,309-18,787,769 | + | C2H9g11268 | CX9g056436 | LOC_Os09g38755 | Os09g0560450 | - | Detail |
| C1H9g25922 | 9:18,788,830-18,789,888 | + | C2H9g20950 | CX9g057721 | LOC_Os09g38759 | Os09g0560500 | - | Detail |
| C1H9g27653 | 9:18,790,640-18,792,824 | + | C2H9g17838 | CX9g054913 | LOC_Os09g38768 | Os09g0560600 | - | Detail |
| C1H9g00606 | 9:18,793,614-18,796,090 | + | C2H9g22121 | CX9g055954 | LOC_Os09g38772 | Os09g0560700 | - | Detail |
| C1H9g04369 | 9:18,795,128-18,802,136 | - | C2H9g18757 | CX9g055464 | LOC_Os09g38784 | Os09g0560850 | - | Detail |
| C1H9g02125 | 9:18,797,080-18,799,775 | + | C2H9g11291 | CX9g055954 | LOC_Os09g38777 | Os09g0560800 | - | Detail |
| C1H9g29491 | 9:18,802,790-18,807,223 | - | C2H9g18757 | CX9g056926 | LOC_Os09g38790 | Os09g0560900 | SIP1 | Detail |
| C1H9g03389 | 9:18,807,938-18,810,000 | + | C2H9g00048 | - | LOC_Os09g38800 | Os09g0561000 | - | Detail |
| C1H9g11670 | 9:18,824,298-18,828,071 | + | C2H9g28628 | CX9g057226 | LOC_Os09g38834 | Os09g0561450 | - | Detail |
| C1H9g10532 | 9:18,828,559-18,831,491 | + | C2H9g07673 | CX9g057226 | LOC_Os09g38840 | Os09g0561500 | WAK90, OsWAK90 | Detail |
| C1H9g28362 | 9:18,832,308-18,835,407 | + | C2H9g04667 | - | LOC_Os09g38850 | Os09g0561600 | DEES1, WAK91, OsWAK91, OsDEES1 | Detail |
| C1H9g04110 | 9:18,843,619-18,847,509 | + | C2H9g09243 | - | LOC_Os09g38900 | Os09g0562400 | - | Detail |
| C1H9g19363 | 9:18,851,650-18,854,226 | + | C2H9g11141 | CX9g057226 | LOC_Os09g38910 | Os09g0562600 | WAK92, OsWAK92, OsDEES1-L4 | Detail |
| C1H9g18815 | 9:18,854,692-18,856,575 | - | C2H9g27162 | CX9g057033 | LOC_Os09g38920 | Os09g0497500 | - | Detail |
| C1H9g04134 | 9:18,857,654-18,864,956 | - | C2H9g03456 | CX9g057411 | LOC_Os09g38930 | Os09g0562750 | - | Detail |
| C1H9g07046 | 9:18,876,099-18,876,873 | + | C2H9g09986 | CX9g055362 | LOC_Os09g38670 | Os09g0559600 | - | Detail |
| C1H9g06523 | 9:18,878,851-18,884,646 | - | C2H9g06709 | CX9g055046 | LOC_Os09g38960 | Os09g0563200 | OsHAK18 | Detail |
| C1H9g19754 | 9:18,888,055-18,893,651 | + | C2H9g01538 | CX9g057500 | LOC_Os09g38970 | Os09g0563250 | - | Detail |
| C1H9g21219 | 9:18,894,185-18,898,267 | + | C2H9g16021 | CX9g054934 | LOC_Os09g38980 | Os09g0563300 | TCD9, OsCPn60alpha3, OsCPn60α3 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g007140 | 1:19,541,738-19,551,510 | - | C1H1g16258 | C2H1g08516 | LOC_Os01g38910 | Os01g0568800 | Gnk2-K1 | Detail |
| CX1g005732 | 1:19,589,667-19,594,035 | + | C1H1g21031 | C2H1g24947 | LOC_Os01g38950 | Os01g0570500 | - | Detail |
| CX1g006869 | 1:19,597,538-19,598,449 | - | C1H1g03105 | C2H1g24876 | LOC_Os01g38960 | Os01g0570601 | - | Detail |
| CX1g003697 | 1:19,603,221-19,608,015 | + | C1H1g16555 | C2H1g10120 | LOC_Os01g38970 | Os01g0570700 | - | Detail |
| CX1g004643 | 1:19,610,625-19,612,827 | - | C1H1g05272 | C2H1g26639 | LOC_Os01g38980 | Os01g0570800 | OsIQM1 | Detail |
| CX1g003765 | 1:19,634,197-19,634,364 | - | - | - | - | - | - | Detail |
| CX1g006688 | 1:19,636,456-19,636,608 | - | - | - | - | - | - | Detail |
| CX1g004950 | 1:19,639,242-19,641,683 | + | C1H1g12320 | C2H1g11902 | LOC_Os01g38990 | Os01g0571000 | - | Detail |
| CX1g002465 | 1:19,642,667-19,647,394 | - | C1H1g21409 | C2H1g27305 | LOC_Os01g39000 | Os01g0571100 | - | Detail |
| CX1g006736 | 1:19,653,685-19,656,099 | + | C1H1g07390 | C2H1g14300 | LOC_Os01g39010 | Os01g0571200 | - | Detail |
| CX1g004092 | 1:19,659,146-19,661,769 | + | C1H1g19692 | C2H1g16893 | LOC_Os01g39020 | Os01g0571300 | OsHsfA7 | Detail |
| CX1g005574 | 1:19,662,790-19,666,491 | + | C1H1g17261 | C2H1g12280 | LOC_Os01g39100 | Os01g0572100 | - | Detail |
| CX1g001024 | 1:19,682,794-19,685,768 | + | C1H1g04588 | C2H1g16877 | LOC_Os01g39110 | Os01g0572300 | - | Detail |
| CX1g004353 | 1:19,719,312-19,724,577 | - | C1H1g13150 | C2H1g07054 | LOC_Os01g39134 | Os01g0572700 | - | Detail |
| CX1g004042 | 1:19,758,467-19,763,918 | + | C1H1g29752 | C2H1g10171 | LOC_Os01g39260 | Os01g0574500 | - | Detail |
| CX1g006116 | 1:19,764,553-19,767,126 | - | C1H1g31440 | C2H1g01556 | LOC_Os01g39270 | Os01g0574600 | OsGR2, GLYR2 | Detail |
| CX1g001219 | 1:19,774,748-19,775,722 | + | - | - | - | - | - | Detail |
| CX1g005853 | 1:19,805,101-19,813,023 | + | C1H1g25426 | C2H1g03847 | LOC_Os01g39310 | Os01g0575000 | - | Detail |
| CX1g001020 | 1:19,821,137-19,821,298 | - | - | - | - | - | - | Detail |
| CX1g007231 | 1:19,824,449-19,828,149 | + | C1H1g10200 | C2H1g02368 | LOC_Os01g39330 | Os01g0575200 | OsbHLH024 | Detail |