| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g00595 | 5:20,255,544-20,257,753 | + | C1H5g12778 | CX5g040097 | LOC_Os05g41010 | Os05g0489100 | - | Detail |
| C2H5g23469 | 5:20,260,244-20,261,460 | - | C1H5g22216 | - | LOC_Os05g41030 | Os05g0489200 | - | Detail |
| C2H5g15924 | 5:20,261,918-20,262,334 | - | C1H5g05615 | CX5g037795 | LOC_Os05g41030 | Os05g0489200 | - | Detail |
| C2H5g27372 | 5:20,265,804-20,269,075 | - | C1H5g29364 | CX5g037436 | LOC_Os05g41060 | Os05g0489600 | - | Detail |
| C2H5g09500 | 5:20,272,302-20,274,674 | + | C1H5g11382 | CX5g037252 | LOC_Os05g41070 | Os05g0489700 | HBF1, OsbZIP42 | Detail |
| C2H5g01943 | 5:20,276,334-20,276,600 | + | C1H5g00326 | CX5g039059 | - | Os05g0489750 | - | Detail |
| C2H5g05322 | 5:20,277,356-20,279,584 | - | C1H5g30374 | CX5g039132 | LOC_Os05g41080 | Os05g0489800 | OsCENH3 | Detail |
| C2H5g07453 | 5:20,280,953-20,284,731 | - | C1H5g17926 | CX5g038078 | LOC_Os05g41090 | Os05g0489900 | DMI3, OsDMI3, OsCCaMK1, OsCCaMK, OsCCAMK, CCAMK | Detail |
| C2H5g20839 | 5:20,285,634-20,287,613 | - | C1H5g27285 | CX5g037785 | LOC_Os05g41100 | Os05g0490000 | - | Detail |
| C2H5g02383 | 5:20,287,853-20,289,688 | + | C1H5g14042 | CX5g039362 | LOC_Os05g41110 | Os05g0490100 | - | Detail |
| C2H5g16191 | 5:20,290,572-20,296,794 | + | C1H5g00258 | CX5g038500 | LOC_Os05g41120 | Os05g0490200 | - | Detail |
| C2H5g27761 | 5:20,299,690-20,300,745 | - | C1H5g17707 | CX5g037621 | LOC_Os05g41130 | Os05g0490300 | - | Detail |
| C2H5g07017 | 5:20,308,897-20,315,355 | - | C1H5g17579 | CX5g039490 | LOC_Os05g41150 | Os05g0490400 | - | Detail |
| C2H5g07145 | 5:20,316,323-20,318,633 | - | C1H5g31086 | CX5g038921 | LOC_Os05g41166 | Os05g0490600 | CSA2 | Detail |
| C2H5g25171 | 5:20,322,902-20,328,726 | - | C1H5g16631 | CX5g037848 | LOC_Os05g41172 | Os05g0490700 | - | Detail |
| C2H5g06467 | 5:20,329,937-20,332,796 | - | C1H5g03177 | CX5g037157 | LOC_Os05g41180 | Os05g0490800 | - | Detail |
| C2H5g15902 | 5:20,336,078-20,336,922 | - | C1H5g04917 | - | LOC_Os05g41190 | Os05g0490900 | - | Detail |
| C2H5g03482 | 5:20,339,026-20,339,554 | - | C1H5g01262 | CX5g040781 | LOC_Os05g41200 | Os05g0491000 | OsCML9 | Detail |
| C2H5g27006 | 5:20,340,490-20,343,661 | - | C1H5g17633 | CX5g040781 | LOC_Os05g41210 | Os05g0491100 | - | Detail |
| C2H5g10562 | 5:20,347,115-20,349,730 | - | C1H5g22455 | CX5g040781 | LOC_Os05g41220 | Os05g0491200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g034089 | 4:16,178,669-16,179,118 | - | - | - | - | Os04g0524800 | - | Detail |
| CX4g036446 | 4:16,178,790-16,182,924 | + | C1H4g16304 | C2H4g12067 | LOC_Os04g32050 | Os04g0390500 | - | Detail |
| CX4g035843 | 4:16,184,775-16,189,042 | + | C1H4g23832 | C2H4g09335 | LOC_Os04g32060 | Os04g0390600 | - | Detail |
| CX4g033665 | 4:16,190,630-16,191,049 | - | C1H5g23717 | C2H1g27901 | - | - | - | Detail |
| CX4g033273 | 4:16,192,213-16,194,013 | + | C1H4g03957 | C2H4g06959 | LOC_Os04g32070 | Os04g0390700 | - | Detail |
| CX4g035026 | 4:16,194,891-16,196,952 | + | C1H4g22009 | C2H4g08791 | LOC_Os04g32080 | Os04g0390800 | - | Detail |
| CX4g032317 | 4:16,199,259-16,204,413 | - | C1H4g26683 | C2H4g28012 | LOC_Os04g32090 | Os04g0391000 | - | Detail |
| CX4g034053 | 4:16,214,543-16,214,743 | + | - | - | - | - | - | Detail |
| CX4g031849 | 4:16,224,311-16,225,929 | + | C1H4g07603 | C2H4g26928 | LOC_Os04g32110 | Os04g0391500 | - | Detail |
| CX4g034277 | 4:16,234,516-16,237,628 | + | C1H4g14710 | C2H4g25707 | LOC_Os04g32150 | Os04g0391900 | - | Detail |
| CX4g031413 | 4:16,250,839-16,251,201 | - | C1H4g19101 | C2H4g00904 | - | - | - | Detail |
| CX4g034327 | 4:16,257,607-16,257,972 | - | C1H4g19101 | C2H4g00904 | - | - | - | Detail |
| CX4g035035 | 4:16,277,832-16,278,240 | - | - | C2H4g10956 | - | - | - | Detail |
| CX4g036058 | 4:16,291,256-16,293,259 | - | C1H4g08605 | C2H4g11378 | LOC_Os04g32270 | Os04g0393300 | - | Detail |
| CX4g035125 | 4:16,311,681-16,312,103 | + | C1H4g17316 | C2H4g05577 | LOC_Os04g32300 | Os04g0393500 | GRX13, OsGRX13, OsROXY1 | Detail |
| CX4g034279 | 4:16,318,365-16,322,988 | + | C1H4g12865 | C2H4g10960 | LOC_Os04g32310 | Os04g0393900 | - | Detail |
| CX4g033887 | 4:16,325,305-16,325,550 | - | - | - | - | - | - | Detail |
| CX4g033567 | 4:16,325,720-16,327,227 | + | C1H4g06922 | C2H4g19964 | LOC_Os04g32320 | Os02g0514500 | OsGDPD2 | Detail |
| CX4g034392 | 4:16,327,367-16,328,331 | + | C1H4g06922 | C2H4g18193 | LOC_Os04g32320 | Os04g0394100 | - | Detail |
| CX4g035538 | 4:16,329,999-16,333,906 | + | C1H4g17845 | C2H4g16524 | LOC_Os04g32330 | Os04g0394200 | - | Detail |