| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H11g01371 | 11:18,869,859-18,874,327 | + | C2H11g09477 | CX11g014448 | LOC_Os11g35840 | Os11g0560900 | - | Detail |
| C1H11g12501 | 11:18,880,962-18,882,947 | + | C2H11g16600 | CX11g011007 | LOC_Os11g30810 | Os11g0503900 | - | Detail |
| C1H11g15827 | 11:18,896,732-18,898,124 | + | C2H11g07163 | CX11g010958 | LOC_Os11g35930 | Os11g0566800 | OsCHS28 | Detail |
| C1H11g05196 | 11:18,937,834-18,939,411 | + | C2H11g18258 | CX11g012075 | LOC_Os11g35930 | Os11g0566800 | OsCHS28 | Detail |
| C1H11g25031 | 11:18,966,649-18,969,614 | - | C2H11g14780 | CX11g012826 | LOC_Os11g36030 | Os11g0568300 | - | Detail |
| C1H11g07031 | 11:18,974,638-18,975,081 | + | C2H11g15085 | CX11g014099 | LOC_Os11g36050 | Os11g0568500 | - | Detail |
| C1H11g26260 | 11:18,976,022-18,980,556 | + | C2H11g09728 | CX11g012110 | LOC_Os11g36060 | Os11g0568600 | - | Detail |
| C1H11g06089 | 11:18,984,671-18,989,669 | + | C2H11g23880 | CX11g014538 | LOC_Os11g36070 | Os11g0568700 | - | Detail |
| C1H11g21320 | 11:18,992,846-18,998,709 | + | C2H11g20593 | CX11g014220 | LOC_Os11g36090 | Os11g0569800 | - | Detail |
| C1H11g07726 | 11:19,001,976-19,002,989 | + | C2H11g00400 | CX11g013497 | LOC_Os11g36140 | Os11g0569300 | - | Detail |
| C1H11g31161 | 11:19,012,900-19,016,496 | + | C2H11g01638 | CX11g012210 | LOC_Os11g35500 | Os11g0570000 | COG1 | Detail |
| C1H11g16496 | 11:19,047,163-19,051,175 | + | C2H11g15178 | CX11g012442 | LOC_Os11g36340 | Os11g0571900 | - | Detail |
| C1H11g22846 | 11:19,053,134-19,062,941 | + | C2H11g29311 | CX11g012542 | LOC_Os11g36390 | Os11g0572100 | - | Detail |
| C1H11g03106 | 11:19,081,478-19,084,887 | - | C2H11g25750 | CX11g011256 | LOC_Os11g36410 | Os11g0572301 | - | Detail |
| C1H11g20066 | 11:19,088,465-19,092,380 | + | C2H11g02062 | CX11g014441 | LOC_Os11g36420 | Os11g0572400 | - | Detail |
| C1H11g00394 | 11:19,092,866-19,097,924 | - | C2H11g14097 | CX11g013970 | LOC_Os11g36430 | Os11g0572500 | - | Detail |
| C1H11g01914 | 11:19,098,538-19,102,365 | + | C2H11g11863 | CX11g011357 | LOC_Os11g36440 | Os11g0572700 | OsCRTISO, MHZ5, MHZ5/CRTISO, CRTISO | Detail |
| C1H11g18936 | 11:19,103,515-19,105,923 | - | C2H11g13422 | CX11g011222 | LOC_Os11g36450 | Os11g0572800 | JMJ710 | Detail |
| C1H11g19358 | 11:19,109,087-19,116,757 | - | C2H11g26770 | CX11g010869 | - | - | - | Detail |
| C1H11g13497 | 11:19,118,039-19,122,436 | - | C2H11g29389 | CX11g010869 | LOC_Os11g36890 | Os11g0577350 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g034089 | 4:16,178,669-16,179,118 | - | - | - | - | Os04g0524800 | - | Detail |
| CX4g036446 | 4:16,178,790-16,182,924 | + | C1H4g16304 | C2H4g12067 | LOC_Os04g32050 | Os04g0390500 | - | Detail |
| CX4g035843 | 4:16,184,775-16,189,042 | + | C1H4g23832 | C2H4g09335 | LOC_Os04g32060 | Os04g0390600 | - | Detail |
| CX4g033665 | 4:16,190,630-16,191,049 | - | C1H5g23717 | C2H1g27901 | - | - | - | Detail |
| CX4g033273 | 4:16,192,213-16,194,013 | + | C1H4g03957 | C2H4g06959 | LOC_Os04g32070 | Os04g0390700 | - | Detail |
| CX4g035026 | 4:16,194,891-16,196,952 | + | C1H4g22009 | C2H4g08791 | LOC_Os04g32080 | Os04g0390800 | - | Detail |
| CX4g032317 | 4:16,199,259-16,204,413 | - | C1H4g26683 | C2H4g28012 | LOC_Os04g32090 | Os04g0391000 | - | Detail |
| CX4g034053 | 4:16,214,543-16,214,743 | + | - | - | - | - | - | Detail |
| CX4g031849 | 4:16,224,311-16,225,929 | + | C1H4g07603 | C2H4g26928 | LOC_Os04g32110 | Os04g0391500 | - | Detail |
| CX4g034277 | 4:16,234,516-16,237,628 | + | C1H4g14710 | C2H4g25707 | LOC_Os04g32150 | Os04g0391900 | - | Detail |
| CX4g031413 | 4:16,250,839-16,251,201 | - | C1H4g19101 | C2H4g00904 | - | - | - | Detail |
| CX4g034327 | 4:16,257,607-16,257,972 | - | C1H4g19101 | C2H4g00904 | - | - | - | Detail |
| CX4g035035 | 4:16,277,832-16,278,240 | - | - | C2H4g10956 | - | - | - | Detail |
| CX4g036058 | 4:16,291,256-16,293,259 | - | C1H4g08605 | C2H4g11378 | LOC_Os04g32270 | Os04g0393300 | - | Detail |
| CX4g035125 | 4:16,311,681-16,312,103 | + | C1H4g17316 | C2H4g05577 | LOC_Os04g32300 | Os04g0393500 | GRX13, OsGRX13, OsROXY1 | Detail |
| CX4g034279 | 4:16,318,365-16,322,988 | + | C1H4g12865 | C2H4g10960 | LOC_Os04g32310 | Os04g0393900 | - | Detail |
| CX4g033887 | 4:16,325,305-16,325,550 | - | - | - | - | - | - | Detail |
| CX4g033567 | 4:16,325,720-16,327,227 | + | C1H4g06922 | C2H4g19964 | LOC_Os04g32320 | Os02g0514500 | OsGDPD2 | Detail |
| CX4g034392 | 4:16,327,367-16,328,331 | + | C1H4g06922 | C2H4g18193 | LOC_Os04g32320 | Os04g0394100 | - | Detail |
| CX4g035538 | 4:16,329,999-16,333,906 | + | C1H4g17845 | C2H4g16524 | LOC_Os04g32330 | Os04g0394200 | - | Detail |