| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g17331 | 4:178,342-181,134 | + | C1H4g21331 | CX4g033419 | LOC_Os04g01150 | Os04g0101700 | - | Detail |
| C2H4g10066 | 4:183,260-186,677 | - | C1H4g00085 | CX4g031572 | LOC_Os04g01160 | Os04g0101800 | SOR1 | Detail |
| C2H4g10312 | 4:232,947-233,177 | + | C1H4g29729 | - | - | - | - | Detail |
| C2H4g18592 | 4:234,043-238,963 | + | C1H4g11244 | CX4g036467 | LOC_Os04g01230 | Os04g0102500 | - | Detail |
| C2H4g15768 | 4:239,269-243,139 | - | C1H4g30914 | CX4g033514 | LOC_Os04g01240 | Os04g0102600 | - | Detail |
| C2H4g26141 | 4:244,161-253,520 | - | C1H4g22444 | CX4g035629 | LOC_Os04g01250 | Os04g0102700 | - | Detail |
| C2H4g17123 | 4:267,864-271,204 | + | C1H4g00201 | CX4g036516 | LOC_Os04g01280 | Os04g0103100 | OsGT43H | Detail |
| C2H4g02757 | 4:271,879-274,804 | - | C1H4g26895 | CX4g032148 | LOC_Os04g01290 | Os04g0103200 | - | Detail |
| C2H4g30267 | 4:276,693-279,859 | - | C1H4g14570 | CX4g035910 | LOC_Os04g01300 | Os04g0103300 | - | Detail |
| C2H4g20007 | 4:310,363-311,577 | - | C1H4g12281 | CX4g034972 | LOC_Os04g01354 | Os04g0103900 | - | Detail |
| C2H4g15928 | 4:312,481-313,702 | - | C1H4g12281 | - | LOC_Os04g01354 | Os04g0103900 | - | Detail |
| C2H4g22862 | 4:332,667-334,847 | + | C1H4g20541 | CX4g033547 | LOC_Os04g01470 | Os04g0104900 | - | Detail |
| C2H4g13201 | 4:338,454-345,921 | + | C1H4g30339 | CX4g035552 | LOC_Os04g01480 | Os04g0105000 | - | Detail |
| C2H4g26442 | 4:352,038-355,316 | + | C1H4g06405 | CX4g034627 | LOC_Os04g01490 | Os04g0105100 | OsSIRP4 | Detail |
| C2H4g01526 | 4:366,267-367,324 | + | C1H4g04722 | CX4g034653 | LOC_Os04g01510 | Os04g0105300 | - | Detail |
| C2H4g03214 | 4:368,478-371,592 | - | C1H4g21605 | CX4g035814 | LOC_Os04g01520 | Os04g0105400 | - | Detail |
| C2H4g10757 | 4:375,245-378,076 | - | C1H4g23453 | CX4g033295 | LOC_Os04g01530 | Os04g0105500 | - | Detail |
| C2H4g24874 | 4:381,445-383,082 | - | C1H4g29467 | CX4g035395 | LOC_Os04g01540 | Os04g0105700 | - | Detail |
| C2H4g21218 | 4:387,025-388,066 | - | C1H4g25930 | CX4g036627 | LOC_Os04g01550 | Os04g0651000 | - | Detail |
| C2H4g03078 | 4:409,235-415,597 | + | C1H4g26708 | CX4g034380 | LOC_Os04g01590 | Os04g0106300 | OsARG, Nglf, Nglf-1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g036222 | 4:15,489,271-15,490,235 | + | C1H4g14850 | C2H4g21030 | LOC_Os04g31030 | Os04g0379600 | - | Detail |
| CX4g032400 | 4:15,491,785-15,494,160 | - | C1H4g24339 | C2H4g09470 | LOC_Os04g31040 | Os04g0379700 | OsVDE | Detail |
| CX4g033149 | 4:15,494,714-15,499,321 | + | C1H4g13382 | C2H4g26874 | LOC_Os04g31050 | Os04g0379800 | - | Detail |
| CX4g036511 | 4:15,500,807-15,502,891 | - | C1H4g26878 | C2H4g26825 | LOC_Os04g31070 | Os04g0379900 | - | Detail |
| CX4g033609 | 4:15,503,923-15,504,579 | + | - | - | - | Os04g0379933 | - | Detail |
| CX4g035310 | 4:15,523,032-15,523,262 | + | - | C2H10g24376 | - | - | - | Detail |
| CX4g035040 | 4:15,530,479-15,532,501 | + | C1H4g30575 | C2H4g19037 | LOC_Os04g31110 | Os04g0380200 | - | Detail |
| CX4g035366 | 4:15,534,319-15,535,683 | - | C1H4g22670 | C2H4g14356 | LOC_Os04g31120 | Os04g0380300 | - | Detail |
| CX4g036431 | 4:15,542,480-15,542,773 | + | - | - | - | Os04g0621700 | PiPR1 | Detail |
| CX4g032870 | 4:15,557,743-15,557,907 | - | - | - | - | Os02g0188201 | - | Detail |
| CX4g033366 | 4:15,568,091-15,570,959 | - | C1H4g10860 | C2H4g11769 | - | - | - | Detail |
| CX4g031408 | 4:15,664,318-15,665,256 | - | C1H4g02661 | C2H4g01312 | LOC_Os04g31170 | Os04g0380800 | - | Detail |
| CX4g033271 | 4:15,683,998-15,692,991 | - | C1H4g01385 | C2H4g29753 | LOC_Os04g31190 | Os04g0381000 | - | Detail |
| CX4g035253 | 4:15,697,444-15,702,157 | + | C1H4g29700 | C2H4g17810 | LOC_Os04g31210 | Os04g0381100 | - | Detail |
| CX4g035237 | 4:15,703,322-15,708,179 | + | C1H4g17691 | C2H4g00277 | LOC_Os04g31240 | Os04g0381400 | - | Detail |
| CX4g031369 | 4:15,709,780-15,710,175 | + | C1H4g16213 | C2H4g17534 | LOC_Os04g31250 | Os04g0381500 | - | Detail |
| CX4g035133 | 4:15,713,740-15,718,773 | + | C1H4g09513 | C2H4g29102 | LOC_Os04g31270 | Os04g0381600 | - | Detail |
| CX4g034109 | 4:15,732,809-15,734,611 | + | C1H4g27606 | C2H4g16108 | LOC_Os04g31290 | Os04g0381700 | OsbHLH156 | Detail |
| CX4g032314 | 4:15,739,763-15,741,513 | + | C1H4g16826 | C2H4g25229 | LOC_Os04g31320 | Os04g0382100 | - | Detail |
| CX4g032461 | 4:15,745,214-15,746,527 | + | C1H2g27409 | C2H4g25229 | LOC_Os04g31330 | Os04g0382200 | EXO70F3, OsEXO70F3, OsExo70F3, OrysaF3_Exo70, OsExo70-F3, Exo70-F3 | Detail |