| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g27247 | 3:20,223,239-20,224,497 | + | C1H3g28027 | CX3g026085 | LOC_Os03g39610 | Os03g0592500 | - | Detail |
| C2H3g20853 | 3:20,241,857-20,253,869 | - | C1H3g16999 | CX3g025924 | LOC_Os03g39640 | Os03g0593200 | - | Detail |
| C2H3g06535 | 3:20,283,881-20,287,652 | + | C1H3g23440 | CX3g029296 | LOC_Os03g39650 | Os03g0593600 | - | Detail |
| C2H3g05166 | 3:20,314,756-20,317,053 | + | C1H3g00424 | CX3g027675 | LOC_Os03g39690 | Os03g0594100 | - | Detail |
| C2H3g02607 | 3:20,318,332-20,319,601 | + | C1H3g00255 | CX3g030581 | LOC_Os03g39760 | Os03g0594900 | - | Detail |
| C2H3g28417 | 3:20,324,383-20,334,050 | - | C1H3g23343 | CX3g029540 | LOC_Os03g39710 | Os03g0594400 | OsMST2, OsSTP2 | Detail |
| C2H3g03244 | 3:20,336,281-20,342,175 | - | C1H3g02853 | CX3g025301 | LOC_Os03g39740 | Os03g0594700 | - | Detail |
| C2H3g04158 | 3:20,347,400-20,349,175 | + | C1H3g28781 | CX3g030581 | LOC_Os03g39760 | Os03g0594900 | - | Detail |
| C2H3g24679 | 3:20,352,846-20,354,206 | + | C1H3g23129 | CX3g029269 | LOC_Os03g39760 | Os03g0594900 | - | Detail |
| C2H3g17648 | 3:20,366,653-20,368,580 | + | C1H3g03263 | CX3g027467 | LOC_Os03g39820 | Os03g0595200 | - | Detail |
| C2H3g26444 | 3:20,369,523-20,370,488 | - | C1H3g23195 | CX3g025791 | LOC_Os03g39830 | Os03g0595300 | - | Detail |
| C2H3g03313 | 3:20,371,582-20,372,649 | - | C1H3g30408 | CX3g029922 | LOC_Os03g39850 | Os03g0595600 | - | Detail |
| C2H3g11519 | 3:20,382,432-20,386,252 | - | C1H3g25743 | CX3g026613 | LOC_Os03g39860 | Os03g0595800 | - | Detail |
| C2H3g18490 | 3:20,392,083-20,395,314 | - | C1H3g12058 | CX3g025071 | LOC_Os03g39910 | Os03g0596400 | - | Detail |
| C2H3g19432 | 3:20,408,589-20,409,446 | - | C1H3g14608 | CX3g028577 | LOC_Os03g40000 | Os03g0596800 | - | Detail |
| C2H3g02583 | 3:20,410,292-20,418,257 | - | C1H3g14273 | CX3g029325 | LOC_Os03g40010 | Os03g0596900 | - | Detail |
| C2H3g09880 | 3:20,435,880-20,438,108 | - | C1H3g16422 | CX3g030669 | LOC_Os03g40020 | Os03g0597200 | YSA | Detail |
| C2H3g23840 | 3:20,439,105-20,444,218 | - | C1H3g01921 | CX3g025021 | LOC_Os03g40040 | Os03g0597400 | - | Detail |
| C2H3g26940 | 3:20,445,817-20,446,342 | - | C1H3g24981 | - | - | - | - | Detail |
| C2H3g01791 | 3:20,449,996-20,451,965 | + | C1H3g16396 | CX3g029448 | LOC_Os03g40060 | Os03g0712600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g036222 | 4:15,489,271-15,490,235 | + | C1H4g14850 | C2H4g21030 | LOC_Os04g31030 | Os04g0379600 | - | Detail |
| CX4g032400 | 4:15,491,785-15,494,160 | - | C1H4g24339 | C2H4g09470 | LOC_Os04g31040 | Os04g0379700 | OsVDE | Detail |
| CX4g033149 | 4:15,494,714-15,499,321 | + | C1H4g13382 | C2H4g26874 | LOC_Os04g31050 | Os04g0379800 | - | Detail |
| CX4g036511 | 4:15,500,807-15,502,891 | - | C1H4g26878 | C2H4g26825 | LOC_Os04g31070 | Os04g0379900 | - | Detail |
| CX4g033609 | 4:15,503,923-15,504,579 | + | - | - | - | Os04g0379933 | - | Detail |
| CX4g035310 | 4:15,523,032-15,523,262 | + | - | C2H10g24376 | - | - | - | Detail |
| CX4g035040 | 4:15,530,479-15,532,501 | + | C1H4g30575 | C2H4g19037 | LOC_Os04g31110 | Os04g0380200 | - | Detail |
| CX4g035366 | 4:15,534,319-15,535,683 | - | C1H4g22670 | C2H4g14356 | LOC_Os04g31120 | Os04g0380300 | - | Detail |
| CX4g036431 | 4:15,542,480-15,542,773 | + | - | - | - | Os04g0621700 | PiPR1 | Detail |
| CX4g032870 | 4:15,557,743-15,557,907 | - | - | - | - | Os02g0188201 | - | Detail |
| CX4g033366 | 4:15,568,091-15,570,959 | - | C1H4g10860 | C2H4g11769 | - | - | - | Detail |
| CX4g031408 | 4:15,664,318-15,665,256 | - | C1H4g02661 | C2H4g01312 | LOC_Os04g31170 | Os04g0380800 | - | Detail |
| CX4g033271 | 4:15,683,998-15,692,991 | - | C1H4g01385 | C2H4g29753 | LOC_Os04g31190 | Os04g0381000 | - | Detail |
| CX4g035253 | 4:15,697,444-15,702,157 | + | C1H4g29700 | C2H4g17810 | LOC_Os04g31210 | Os04g0381100 | - | Detail |
| CX4g035237 | 4:15,703,322-15,708,179 | + | C1H4g17691 | C2H4g00277 | LOC_Os04g31240 | Os04g0381400 | - | Detail |
| CX4g031369 | 4:15,709,780-15,710,175 | + | C1H4g16213 | C2H4g17534 | LOC_Os04g31250 | Os04g0381500 | - | Detail |
| CX4g035133 | 4:15,713,740-15,718,773 | + | C1H4g09513 | C2H4g29102 | LOC_Os04g31270 | Os04g0381600 | - | Detail |
| CX4g034109 | 4:15,732,809-15,734,611 | + | C1H4g27606 | C2H4g16108 | LOC_Os04g31290 | Os04g0381700 | OsbHLH156 | Detail |
| CX4g032314 | 4:15,739,763-15,741,513 | + | C1H4g16826 | C2H4g25229 | LOC_Os04g31320 | Os04g0382100 | - | Detail |
| CX4g032461 | 4:15,745,214-15,746,527 | + | C1H2g27409 | C2H4g25229 | LOC_Os04g31330 | Os04g0382200 | EXO70F3, OsEXO70F3, OsExo70F3, OrysaF3_Exo70, OsExo70-F3, Exo70-F3 | Detail |