| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g17244 | 6:370,535-371,308 | - | - | CX6g045921 | LOC_Os06g01990 | Os06g0109500 | - | Detail |
| C2H6g14223 | 6:373,031-375,368 | + | C1H6g25444 | CX6g043422 | LOC_Os06g02000 | Os06g0109600 | - | Detail |
| C2H6g01137 | 6:381,716-386,766 | + | C1H6g18131 | CX6g045797 | LOC_Os06g02019 | Os06g0110000 | KAO | Detail |
| C2H6g04108 | 6:388,601-392,064 | + | C1H6g28448 | CX6g044545 | LOC_Os06g02028 | Os06g0110100 | - | Detail |
| C2H6g22029 | 6:393,545-393,805 | + | - | CX6g041462 | LOC_Os06g02040 | Os06g0110200 | OsLEA4 | Detail |
| C2H6g22524 | 6:402,387-424,047 | + | C1H6g02561 | CX6g042012 | LOC_Os06g02260 | Os06g0112800 | - | Detail |
| C2H6g13845 | 6:430,919-432,135 | - | C1H6g31753 | CX6g045486 | LOC_Os06g02250 | Os06g0112700 | Os2R_MYB62 | Detail |
| C2H6g04392 | 6:448,327-450,672 | - | C1H6g11536 | CX6g044536 | LOC_Os06g02240 | Os06g0112400 | - | Detail |
| C2H6g09602 | 6:451,758-453,861 | - | C1H6g02471 | CX6g044772 | LOC_Os06g02230 | Os06g0112300 | - | Detail |
| C2H6g15025 | 6:454,871-457,396 | - | C1H6g21798 | CX6g044628 | LOC_Os06g02220 | Os06g0112200 | OsMTN | Detail |
| C2H6g02993 | 6:461,762-462,379 | + | C1H6g09154 | CX6g041233 | - | - | - | Detail |
| C2H6g16206 | 6:462,495-464,776 | + | C1H6g17853 | CX6g041233 | - | - | - | Detail |
| C2H6g26488 | 6:467,647-470,695 | + | C1H6g29129 | CX6g041538 | LOC_Os06g02210 | Os06g0112100 | - | Detail |
| C2H6g12380 | 6:471,877-474,081 | - | C1H6g18928 | CX6g041296 | LOC_Os06g02200 | Os06g0112000 | OsPPR16 | Detail |
| C2H6g20294 | 6:482,238-487,420 | + | C1H6g00969 | CX6g042016 | LOC_Os06g02180 | Os06g0111800 | - | Detail |
| C2H6g06410 | 6:489,125-490,567 | - | - | CX6g043977 | LOC_Os06g02170 | Os06g0111700 | - | Detail |
| C2H6g13585 | 6:491,159-500,993 | - | C1H6g19887 | CX6g044612 | LOC_Os06g02160 | Os06g0111600 | - | Detail |
| C2H6g03047 | 6:501,532-502,974 | - | C1H6g16131 | CX6g041812 | LOC_Os06g02144 | Os06g0111500 | - | Detail |
| C2H6g08506 | 6:507,268-513,912 | + | C1H6g13996 | CX6g044661 | LOC_Os06g02130 | Os06g0111400 | - | Detail |
| C2H6g13540 | 6:514,292-518,384 | + | C1H6g00113 | CX6g043917 | LOC_Os06g02120 | Os06g0111300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g036222 | 4:15,489,271-15,490,235 | + | C1H4g14850 | C2H4g21030 | LOC_Os04g31030 | Os04g0379600 | - | Detail |
| CX4g032400 | 4:15,491,785-15,494,160 | - | C1H4g24339 | C2H4g09470 | LOC_Os04g31040 | Os04g0379700 | OsVDE | Detail |
| CX4g033149 | 4:15,494,714-15,499,321 | + | C1H4g13382 | C2H4g26874 | LOC_Os04g31050 | Os04g0379800 | - | Detail |
| CX4g036511 | 4:15,500,807-15,502,891 | - | C1H4g26878 | C2H4g26825 | LOC_Os04g31070 | Os04g0379900 | - | Detail |
| CX4g033609 | 4:15,503,923-15,504,579 | + | - | - | - | Os04g0379933 | - | Detail |
| CX4g035310 | 4:15,523,032-15,523,262 | + | - | C2H10g24376 | - | - | - | Detail |
| CX4g035040 | 4:15,530,479-15,532,501 | + | C1H4g30575 | C2H4g19037 | LOC_Os04g31110 | Os04g0380200 | - | Detail |
| CX4g035366 | 4:15,534,319-15,535,683 | - | C1H4g22670 | C2H4g14356 | LOC_Os04g31120 | Os04g0380300 | - | Detail |
| CX4g036431 | 4:15,542,480-15,542,773 | + | - | - | - | Os04g0621700 | PiPR1 | Detail |
| CX4g032870 | 4:15,557,743-15,557,907 | - | - | - | - | Os02g0188201 | - | Detail |
| CX4g033366 | 4:15,568,091-15,570,959 | - | C1H4g10860 | C2H4g11769 | - | - | - | Detail |
| CX4g031408 | 4:15,664,318-15,665,256 | - | C1H4g02661 | C2H4g01312 | LOC_Os04g31170 | Os04g0380800 | - | Detail |
| CX4g033271 | 4:15,683,998-15,692,991 | - | C1H4g01385 | C2H4g29753 | LOC_Os04g31190 | Os04g0381000 | - | Detail |
| CX4g035253 | 4:15,697,444-15,702,157 | + | C1H4g29700 | C2H4g17810 | LOC_Os04g31210 | Os04g0381100 | - | Detail |
| CX4g035237 | 4:15,703,322-15,708,179 | + | C1H4g17691 | C2H4g00277 | LOC_Os04g31240 | Os04g0381400 | - | Detail |
| CX4g031369 | 4:15,709,780-15,710,175 | + | C1H4g16213 | C2H4g17534 | LOC_Os04g31250 | Os04g0381500 | - | Detail |
| CX4g035133 | 4:15,713,740-15,718,773 | + | C1H4g09513 | C2H4g29102 | LOC_Os04g31270 | Os04g0381600 | - | Detail |
| CX4g034109 | 4:15,732,809-15,734,611 | + | C1H4g27606 | C2H4g16108 | LOC_Os04g31290 | Os04g0381700 | OsbHLH156 | Detail |
| CX4g032314 | 4:15,739,763-15,741,513 | + | C1H4g16826 | C2H4g25229 | LOC_Os04g31320 | Os04g0382100 | - | Detail |
| CX4g032461 | 4:15,745,214-15,746,527 | + | C1H2g27409 | C2H4g25229 | LOC_Os04g31330 | Os04g0382200 | EXO70F3, OsEXO70F3, OsExo70F3, OrysaF3_Exo70, OsExo70-F3, Exo70-F3 | Detail |