| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g19018 | 1:29,090,278-29,091,468 | - | C2H1g22698 | CX1g002914 | LOC_Os01g56390 | Os01g0770400 | - | Detail |
| C1H1g17741 | 1:29,093,609-29,096,832 | - | C2H1g05759 | CX1g002914 | LOC_Os01g56400 | Os01g0770500 | - | Detail |
| C1H1g14879 | 1:29,098,523-29,098,999 | + | - | CX1g005473 | LOC_Os01g56420 | Os01g0770700 | OsCOPT1 | Detail |
| C1H1g21445 | 1:29,100,961-29,101,569 | + | - | CX1g004170 | LOC_Os01g56430 | Os01g0770800 | - | Detail |
| C1H1g27537 | 1:29,107,839-29,108,522 | - | C2H1g05454 | CX1g006911 | LOC_Os01g56450 | Os01g0771000 | - | Detail |
| C1H1g10943 | 1:29,119,689-29,121,938 | - | C2H1g02164 | CX1g002609 | LOC_Os01g56460 | Os01g0771100 | - | Detail |
| C1H1g21728 | 1:29,124,702-29,126,222 | + | C2H1g21925 | CX1g002494 | LOC_Os01g56470 | Os01g0771200 | XB24 | Detail |
| C1H1g23479 | 1:29,132,384-29,149,128 | - | C2H1g08277 | CX1g002023 | LOC_Os01g56490 | Os01g0771400 | - | Detail |
| C1H1g09719 | 1:29,158,874-29,164,327 | - | C2H1g09013 | CX1g003064 | LOC_Os01g56510 | Os01g0771900 | - | Detail |
| C1H1g15587 | 1:29,164,785-29,170,094 | - | C2H1g10326 | CX1g004890 | LOC_Os01g56520 | Os01g0772000 | OsDRB6 | Detail |
| C1H1g16550 | 1:29,172,353-29,173,274 | - | C2H1g20436 | CX1g004076 | LOC_Os01g56530 | Os01g0772100 | - | Detail |
| C1H1g10415 | 1:29,173,956-29,176,636 | - | C2H1g23179 | CX1g002201 | LOC_Os01g56540 | Os01g0772150 | - | Detail |
| C1H1g16286 | 1:29,177,442-29,181,060 | - | C2H1g01361 | CX1g006273 | LOC_Os01g56550 | Os01g0772200 | - | Detail |
| C1H1g24646 | 1:29,187,488-29,189,981 | + | C2H1g16043 | CX1g001770 | LOC_Os01g56560 | Os01g0772400 | - | Detail |
| C1H1g22554 | 1:29,190,636-29,192,070 | - | C2H1g11972 | CX1g000006 | LOC_Os01g56570 | Os01g0772500 | - | Detail |
| C1H1g31413 | 1:29,198,339-29,205,533 | + | C2H1g14754 | CX1g003746 | LOC_Os01g56580 | Os01g0772600 | - | Detail |
| C1H1g02674 | 1:29,206,792-29,230,045 | + | C2H1g21696 | CX1g007111 | LOC_Os01g56590 | Os01g0772700 | - | Detail |
| C1H1g01600 | 1:29,234,513-29,238,555 | + | C2H1g02753 | CX1g000007 | LOC_Os01g56600 | Os01g0772800 | - | Detail |
| C1H1g07828 | 1:29,238,841-29,239,050 | - | C2H1g15956 | CX1g003614 | LOC_Os01g56610 | Os01g0772900 | - | Detail |
| C1H1g01596 | 1:29,239,140-29,240,680 | - | C2H1g15956 | CX1g003614 | LOC_Os01g56610 | Os01g0772900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g036222 | 4:15,489,271-15,490,235 | + | C1H4g14850 | C2H4g21030 | LOC_Os04g31030 | Os04g0379600 | - | Detail |
| CX4g032400 | 4:15,491,785-15,494,160 | - | C1H4g24339 | C2H4g09470 | LOC_Os04g31040 | Os04g0379700 | OsVDE | Detail |
| CX4g033149 | 4:15,494,714-15,499,321 | + | C1H4g13382 | C2H4g26874 | LOC_Os04g31050 | Os04g0379800 | - | Detail |
| CX4g036511 | 4:15,500,807-15,502,891 | - | C1H4g26878 | C2H4g26825 | LOC_Os04g31070 | Os04g0379900 | - | Detail |
| CX4g033609 | 4:15,503,923-15,504,579 | + | - | - | - | Os04g0379933 | - | Detail |
| CX4g035310 | 4:15,523,032-15,523,262 | + | - | C2H10g24376 | - | - | - | Detail |
| CX4g035040 | 4:15,530,479-15,532,501 | + | C1H4g30575 | C2H4g19037 | LOC_Os04g31110 | Os04g0380200 | - | Detail |
| CX4g035366 | 4:15,534,319-15,535,683 | - | C1H4g22670 | C2H4g14356 | LOC_Os04g31120 | Os04g0380300 | - | Detail |
| CX4g036431 | 4:15,542,480-15,542,773 | + | - | - | - | Os04g0621700 | PiPR1 | Detail |
| CX4g032870 | 4:15,557,743-15,557,907 | - | - | - | - | Os02g0188201 | - | Detail |
| CX4g033366 | 4:15,568,091-15,570,959 | - | C1H4g10860 | C2H4g11769 | - | - | - | Detail |
| CX4g031408 | 4:15,664,318-15,665,256 | - | C1H4g02661 | C2H4g01312 | LOC_Os04g31170 | Os04g0380800 | - | Detail |
| CX4g033271 | 4:15,683,998-15,692,991 | - | C1H4g01385 | C2H4g29753 | LOC_Os04g31190 | Os04g0381000 | - | Detail |
| CX4g035253 | 4:15,697,444-15,702,157 | + | C1H4g29700 | C2H4g17810 | LOC_Os04g31210 | Os04g0381100 | - | Detail |
| CX4g035237 | 4:15,703,322-15,708,179 | + | C1H4g17691 | C2H4g00277 | LOC_Os04g31240 | Os04g0381400 | - | Detail |
| CX4g031369 | 4:15,709,780-15,710,175 | + | C1H4g16213 | C2H4g17534 | LOC_Os04g31250 | Os04g0381500 | - | Detail |
| CX4g035133 | 4:15,713,740-15,718,773 | + | C1H4g09513 | C2H4g29102 | LOC_Os04g31270 | Os04g0381600 | - | Detail |
| CX4g034109 | 4:15,732,809-15,734,611 | + | C1H4g27606 | C2H4g16108 | LOC_Os04g31290 | Os04g0381700 | OsbHLH156 | Detail |
| CX4g032314 | 4:15,739,763-15,741,513 | + | C1H4g16826 | C2H4g25229 | LOC_Os04g31320 | Os04g0382100 | - | Detail |
| CX4g032461 | 4:15,745,214-15,746,527 | + | C1H2g27409 | C2H4g25229 | LOC_Os04g31330 | Os04g0382200 | EXO70F3, OsEXO70F3, OsExo70F3, OrysaF3_Exo70, OsExo70-F3, Exo70-F3 | Detail |