| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g15651 | 6:1,495,958-1,500,277 | + | C2H6g11346 | CX6g042092 | LOC_Os06g04640 | Os06g0138000 | - | Detail |
| C1H6g27478 | 6:1,500,988-1,502,699 | - | C2H6g15488 | CX6g043067 | LOC_Os06g04650 | Os06g0138100 | - | Detail |
| C1H6g25263 | 6:1,503,059-1,507,308 | + | C2H6g16932 | CX6g041227 | LOC_Os06g04660 | Os06g0138200 | - | Detail |
| C1H6g22039 | 6:1,514,705-1,515,718 | + | C2H6g00635 | CX6g044072 | LOC_Os06g04670 | Os06g0138400 | - | Detail |
| C1H6g02705 | 6:1,525,699-1,526,578 | + | C2H6g23253 | CX6g044076 | LOC_Os06g04780 | Os06g0139700 | - | Detail |
| C1H6g05873 | 6:1,528,403-1,529,467 | + | C2H6g07231 | - | LOC_Os06g04734 | Os06g0138900 | - | Detail |
| C1H6g03863 | 6:1,531,234-1,536,270 | - | C2H6g10016 | CX6g042246 | LOC_Os06g04710 | Os06g0139000 | DDF1 | Detail |
| C1H6g19963 | 6:1,542,923-1,543,614 | + | C2H6g03556 | - | LOC_Os06g04760 | - | - | Detail |
| C1H6g18760 | 6:1,545,974-1,548,358 | + | C2H6g10420 | CX6g044076 | LOC_Os06g04780 | Os06g0139700 | - | Detail |
| C1H6g11816 | 6:1,550,302-1,552,325 | + | C2H6g16226 | CX6g044405 | LOC_Os06g04790 | Os06g0139800 | - | Detail |
| C1H6g26349 | 6:1,552,786-1,556,109 | - | C2H6g23209 | CX6g045953 | LOC_Os06g04800 | Os06g0139900 | - | Detail |
| C1H6g08381 | 6:1,561,828-1,566,879 | - | C2H6g14757 | - | LOC_Os06g04820 | Os06g0140100 | spd6 | Detail |
| C1H6g12632 | 6:1,579,044-1,579,926 | + | C2H6g11310 | CX6g045336 | LOC_Os06g04850 | Os06g0140400 | - | Detail |
| C1H6g28945 | 6:1,593,268-1,594,305 | + | C2H6g12351 | CX6g042238 | LOC_Os06g04870 | Os06g0140700 | - | Detail |
| C1H6g16218 | 6:1,595,577-1,602,009 | - | C2H6g07431 | CX6g041483 | LOC_Os06g04880 | Os06g0140800 | - | Detail |
| C1H6g10901 | 6:1,610,759-1,612,398 | - | C2H6g06281 | CX6g042963 | LOC_Os06g04900 | Os06g0141100 | OsSTP19 | Detail |
| C1H6g22682 | 6:1,613,201-1,616,302 | - | C2H6g22276 | CX6g042744 | LOC_Os06g04910 | Os06g0141166 | - | Detail |
| C1H6g07568 | 6:1,618,763-1,620,011 | - | C2H6g22440 | CX6g044396 | LOC_Os06g04920 | Os06g0141200 | OsZFP1 | Detail |
| C1H6g14984 | 6:1,627,056-1,627,835 | - | C2H6g06397 | - | LOC_Os06g04990 | Os06g0141400 | - | Detail |
| C1H6g03765 | 6:1,627,949-1,629,205 | - | - | - | - | Os06g0141400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g036222 | 4:15,489,271-15,490,235 | + | C1H4g14850 | C2H4g21030 | LOC_Os04g31030 | Os04g0379600 | - | Detail |
| CX4g032400 | 4:15,491,785-15,494,160 | - | C1H4g24339 | C2H4g09470 | LOC_Os04g31040 | Os04g0379700 | OsVDE | Detail |
| CX4g033149 | 4:15,494,714-15,499,321 | + | C1H4g13382 | C2H4g26874 | LOC_Os04g31050 | Os04g0379800 | - | Detail |
| CX4g036511 | 4:15,500,807-15,502,891 | - | C1H4g26878 | C2H4g26825 | LOC_Os04g31070 | Os04g0379900 | - | Detail |
| CX4g033609 | 4:15,503,923-15,504,579 | + | - | - | - | Os04g0379933 | - | Detail |
| CX4g035310 | 4:15,523,032-15,523,262 | + | - | C2H10g24376 | - | - | - | Detail |
| CX4g035040 | 4:15,530,479-15,532,501 | + | C1H4g30575 | C2H4g19037 | LOC_Os04g31110 | Os04g0380200 | - | Detail |
| CX4g035366 | 4:15,534,319-15,535,683 | - | C1H4g22670 | C2H4g14356 | LOC_Os04g31120 | Os04g0380300 | - | Detail |
| CX4g036431 | 4:15,542,480-15,542,773 | + | - | - | - | Os04g0621700 | PiPR1 | Detail |
| CX4g032870 | 4:15,557,743-15,557,907 | - | - | - | - | Os02g0188201 | - | Detail |
| CX4g033366 | 4:15,568,091-15,570,959 | - | C1H4g10860 | C2H4g11769 | - | - | - | Detail |
| CX4g031408 | 4:15,664,318-15,665,256 | - | C1H4g02661 | C2H4g01312 | LOC_Os04g31170 | Os04g0380800 | - | Detail |
| CX4g033271 | 4:15,683,998-15,692,991 | - | C1H4g01385 | C2H4g29753 | LOC_Os04g31190 | Os04g0381000 | - | Detail |
| CX4g035253 | 4:15,697,444-15,702,157 | + | C1H4g29700 | C2H4g17810 | LOC_Os04g31210 | Os04g0381100 | - | Detail |
| CX4g035237 | 4:15,703,322-15,708,179 | + | C1H4g17691 | C2H4g00277 | LOC_Os04g31240 | Os04g0381400 | - | Detail |
| CX4g031369 | 4:15,709,780-15,710,175 | + | C1H4g16213 | C2H4g17534 | LOC_Os04g31250 | Os04g0381500 | - | Detail |
| CX4g035133 | 4:15,713,740-15,718,773 | + | C1H4g09513 | C2H4g29102 | LOC_Os04g31270 | Os04g0381600 | - | Detail |
| CX4g034109 | 4:15,732,809-15,734,611 | + | C1H4g27606 | C2H4g16108 | LOC_Os04g31290 | Os04g0381700 | OsbHLH156 | Detail |
| CX4g032314 | 4:15,739,763-15,741,513 | + | C1H4g16826 | C2H4g25229 | LOC_Os04g31320 | Os04g0382100 | - | Detail |
| CX4g032461 | 4:15,745,214-15,746,527 | + | C1H2g27409 | C2H4g25229 | LOC_Os04g31330 | Os04g0382200 | EXO70F3, OsEXO70F3, OsExo70F3, OrysaF3_Exo70, OsExo70-F3, Exo70-F3 | Detail |