| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g28597 | 3:2,972,225-2,972,470 | - | C1H3g08120 | - | LOC_Os03g06790 | Os03g0163600 | - | Detail |
| C2H3g24201 | 3:2,984,055-2,984,324 | - | C1H3g08120 | CX6g044926 | LOC_Os03g06800 | Os03g0163900 | - | Detail |
| C2H3g08001 | 3:2,998,583-3,001,029 | + | C1H3g31538 | CX3g031186 | LOC_Os03g06880 | Os03g0164700 | - | Detail |
| C2H3g12377 | 3:3,002,486-3,004,841 | - | C1H3g13873 | CX3g030325 | LOC_Os03g06890 | Os03g0164800 | - | Detail |
| C2H3g23822 | 3:3,006,975-3,007,508 | + | C1H3g21506 | CX3g029502 | - | Os03g0164901 | - | Detail |
| C2H3g07393 | 3:3,011,056-3,021,317 | - | C1H3g29883 | CX3g026349 | LOC_Os03g06900 | Os03g0165000 | TOP3α | Detail |
| C2H3g24120 | 3:3,021,674-3,025,793 | - | C1H3g17508 | CX3g027841 | LOC_Os03g06910 | Os03g0165100 | - | Detail |
| C2H3g16754 | 3:3,026,112-3,028,022 | + | C1H3g30143 | - | LOC_Os03g06920 | - | - | Detail |
| C2H3g12144 | 3:3,028,381-3,034,497 | + | C1H3g17985 | CX3g027850 | LOC_Os03g06920 | Os03g0165266 | OsCHR730, CHR730 | Detail |
| C2H3g20116 | 3:3,035,390-3,037,459 | - | C1H3g21677 | CX3g028821 | LOC_Os03g06930 | Os03g0165300 | - | Detail |
| C2H3g10784 | 3:3,037,579-3,039,438 | - | C1H3g31542 | - | - | - | - | Detail |
| C2H3g07914 | 3:3,043,635-3,043,931 | + | C1H3g17647 | CX3g025536 | - | Os03g0165375 | - | Detail |
| C2H3g24716 | 3:3,046,983-3,053,495 | - | C1H3g30263 | CX3g028153 | LOC_Os03g06940 | Os03g0165400 | - | Detail |
| C2H3g14394 | 3:3,061,798-3,072,911 | - | C1H3g12191 | CX3g027771 | LOC_Os03g06950 | Os03g0165600 | - | Detail |
| C2H3g15746 | 3:3,074,102-3,076,440 | + | C1H3g13896 | CX3g030842 | LOC_Os03g06960 | Os03g0165800 | - | Detail |
| C2H3g22818 | 3:3,078,105-3,080,783 | - | C1H3g22228 | CX3g028104 | LOC_Os03g06970 | Os03g0165900 | - | Detail |
| C2H3g18146 | 3:3,081,081-3,081,401 | - | C1H3g16704 | - | - | - | - | Detail |
| C2H3g11279 | 3:3,084,398-3,087,708 | - | C1H3g06157 | CX3g026438 | LOC_Os03g06980 | Os03g0166000 | - | Detail |
| C2H3g30212 | 3:3,089,933-3,092,072 | + | C1H3g11602 | CX3g025523 | LOC_Os03g07000 | Os03g0166100 | - | Detail |
| C2H3g23098 | 3:3,092,794-3,094,670 | + | C1H3g09271 | CX3g027208 | LOC_Os03g07000 | Os03g0166200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g032157 | 4:13,964,469-13,971,418 | + | C1H4g19418 | C2H4g16562 | LOC_Os04g28020 | Os04g0347800 | PRD1 | Detail |
| CX4g033951 | 4:13,979,326-13,984,578 | + | C1H4g22332 | C2H4g25578 | LOC_Os04g28040 | Os04g0347900 | - | Detail |
| CX4g033086 | 4:13,987,958-13,991,043 | + | C1H4g13797 | C2H4g20901 | LOC_Os04g28050 | Os04g0348000 | - | Detail |
| CX4g034188 | 4:13,992,645-13,995,777 | - | C1H4g24314 | C2H4g08837 | LOC_Os04g28060 | Os04g0348100 | - | Detail |
| CX4g032168 | 4:13,997,935-13,998,105 | - | - | - | - | - | - | Detail |
| CX4g035633 | 4:14,006,653-14,013,661 | + | C1H4g16463 | C2H4g13837 | LOC_Os04g28090 | Os04g0348300 | - | Detail |
| CX4g036157 | 4:14,018,330-14,021,374 | - | C1H4g18035 | C2H4g14798 | LOC_Os04g28100 | Os04g0348400 | OsPUB7 | Detail |
| CX4g033226 | 4:14,078,513-14,078,674 | + | C1H3g20268 | C2H3g21623 | - | - | - | Detail |
| CX4g035408 | 4:14,079,514-14,083,145 | - | C1H4g18144 | C2H4g00376 | LOC_Os04g28170 | Os04g0349401 | - | Detail |
| CX4g032516 | 4:14,085,235-14,087,513 | - | C1H4g07697 | C2H4g26754 | LOC_Os04g28180 | Os04g0349500 | - | Detail |
| CX4g035158 | 4:14,103,669-14,105,909 | + | C1H4g25714 | C2H4g04479 | LOC_Os04g28234 | Os04g0349600 | - | Detail |
| CX4g034310 | 4:14,109,168-14,113,966 | - | C1H4g08997 | C2H4g11001 | LOC_Os04g28210 | Os04g0349700 | - | Detail |
| CX4g034236 | 4:14,125,262-14,127,748 | + | C1H4g05397 | C2H4g17175 | LOC_Os04g28234 | Os04g0350000 | - | Detail |
| CX4g036288 | 4:14,134,572-14,135,027 | - | - | - | LOC_Os04g28250 | Os04g0350100 | - | Detail |
| CX4g035357 | 4:14,140,407-14,147,336 | + | C1H4g22441 | C2H4g23045 | LOC_Os04g28260 | Os04g0350300 | - | Detail |
| CX4g036619 | 4:14,149,839-14,150,000 | - | - | - | - | - | - | Detail |
| CX4g033584 | 4:14,155,693-14,155,917 | + | - | - | - | - | - | Detail |
| CX4g032228 | 4:14,167,310-14,170,241 | - | C1H4g22936 | C2H4g11650 | LOC_Os04g28280 | Os04g0350700 | AN1, An-1, OsbHLH093, RAE1, An-1/RAE1, RAE1/An-1, Awn4-2 | Detail |
| CX4g033472 | 4:14,193,425-14,194,757 | + | C1H4g25714 | C2H4g04479 | LOC_Os04g28300 | Os04g0349600 | - | Detail |
| CX4g032429 | 4:14,223,003-14,223,206 | + | - | - | - | - | - | Detail |