| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g13093 | 12:2,814,988-2,819,235 | + | C1H12g22557 | CX12g017471 | LOC_Os12g06380 | Os12g0160900 | - | Detail |
| C2H12g14426 | 12:2,844,188-2,846,547 | - | C1H12g04535 | CX12g018410 | LOC_Os12g06440 | Os12g0161500 | - | Detail |
| C2H12g21634 | 12:2,860,331-2,865,973 | - | C1H12g19684 | CX12g018410 | LOC_Os12g06464 | Os12g0161700 | - | Detail |
| C2H12g07878 | 12:2,883,398-2,887,676 | - | C1H12g07840 | CX12g018410 | LOC_Os12g06480 | Os12g0161900 | - | Detail |
| C2H12g10139 | 12:2,894,150-2,897,210 | - | C1H12g14206 | CX12g018308 | LOC_Os12g06490 | Os12g0162100 | OsWNK9 | Detail |
| C2H12g22630 | 12:2,909,098-2,914,235 | - | C1H12g18731 | CX12g018571 | LOC_Os12g06510 | Os12g0162400 | OsCBL6 | Detail |
| C2H12g02926 | 12:2,917,765-2,921,486 | + | C1H12g07616 | CX12g015432 | LOC_Os12g06520 | Os12g0162500 | - | Detail |
| C2H12g07375 | 12:2,938,804-2,945,924 | + | C1H12g07730 | CX12g017450 | LOC_Os12g06670 | Os12g0163800 | - | Detail |
| C2H12g06388 | 12:2,947,737-2,951,238 | + | C1H12g11936 | CX12g015091 | LOC_Os12g06660 | Os12g0163700 | - | Detail |
| C2H12g15602 | 12:2,956,944-2,961,016 | + | C1H12g27241 | - | - | - | - | Detail |
| C2H12g05777 | 12:2,962,575-2,966,690 | + | C1H12g10951 | CX12g017371 | LOC_Os12g06630 | Os12g0163400 | - | Detail |
| C2H12g23191 | 12:2,967,659-2,970,939 | + | C1H12g15474 | CX12g018416 | LOC_Os12g06620 | Os12g0163300 | - | Detail |
| C2H12g28717 | 12:2,971,610-2,977,871 | - | C1H12g05227 | CX12g017876 | LOC_Os12g06610 | Os12g0163200 | - | Detail |
| C2H12g09245 | 12:2,980,364-2,983,937 | + | C1H12g11426 | CX12g017374 | LOC_Os12g06570 | Os12g0163000 | OsCNGC8 | Detail |
| C2H12g09409 | 12:2,985,913-2,990,857 | + | C1H12g23930 | CX12g018286 | LOC_Os12g06560 | Os12g0162900 | - | Detail |
| C2H12g06347 | 12:3,012,953-3,013,792 | - | C1H12g22069 | - | - | - | - | Detail |
| C2H12g05337 | 12:3,015,793-3,022,087 | - | C1H12g04385 | CX12g018760 | LOC_Os12g06800 | Os12g0164800 | - | Detail |
| C2H12g11169 | 12:3,024,544-3,036,128 | - | C1H12g12257 | - | - | - | - | Detail |
| C2H12g04241 | 12:3,039,653-3,041,192 | - | C1H12g15193 | CX12g016446 | LOC_Os12g06820 | Os12g0165200 | - | Detail |
| C2H12g06250 | 12:3,042,256-3,043,221 | + | C1H12g06624 | CX12g017703 | LOC_Os12g06830 | Os12g0170800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g032157 | 4:13,964,469-13,971,418 | + | C1H4g19418 | C2H4g16562 | LOC_Os04g28020 | Os04g0347800 | PRD1 | Detail |
| CX4g033951 | 4:13,979,326-13,984,578 | + | C1H4g22332 | C2H4g25578 | LOC_Os04g28040 | Os04g0347900 | - | Detail |
| CX4g033086 | 4:13,987,958-13,991,043 | + | C1H4g13797 | C2H4g20901 | LOC_Os04g28050 | Os04g0348000 | - | Detail |
| CX4g034188 | 4:13,992,645-13,995,777 | - | C1H4g24314 | C2H4g08837 | LOC_Os04g28060 | Os04g0348100 | - | Detail |
| CX4g032168 | 4:13,997,935-13,998,105 | - | - | - | - | - | - | Detail |
| CX4g035633 | 4:14,006,653-14,013,661 | + | C1H4g16463 | C2H4g13837 | LOC_Os04g28090 | Os04g0348300 | - | Detail |
| CX4g036157 | 4:14,018,330-14,021,374 | - | C1H4g18035 | C2H4g14798 | LOC_Os04g28100 | Os04g0348400 | OsPUB7 | Detail |
| CX4g033226 | 4:14,078,513-14,078,674 | + | C1H3g20268 | C2H3g21623 | - | - | - | Detail |
| CX4g035408 | 4:14,079,514-14,083,145 | - | C1H4g18144 | C2H4g00376 | LOC_Os04g28170 | Os04g0349401 | - | Detail |
| CX4g032516 | 4:14,085,235-14,087,513 | - | C1H4g07697 | C2H4g26754 | LOC_Os04g28180 | Os04g0349500 | - | Detail |
| CX4g035158 | 4:14,103,669-14,105,909 | + | C1H4g25714 | C2H4g04479 | LOC_Os04g28234 | Os04g0349600 | - | Detail |
| CX4g034310 | 4:14,109,168-14,113,966 | - | C1H4g08997 | C2H4g11001 | LOC_Os04g28210 | Os04g0349700 | - | Detail |
| CX4g034236 | 4:14,125,262-14,127,748 | + | C1H4g05397 | C2H4g17175 | LOC_Os04g28234 | Os04g0350000 | - | Detail |
| CX4g036288 | 4:14,134,572-14,135,027 | - | - | - | LOC_Os04g28250 | Os04g0350100 | - | Detail |
| CX4g035357 | 4:14,140,407-14,147,336 | + | C1H4g22441 | C2H4g23045 | LOC_Os04g28260 | Os04g0350300 | - | Detail |
| CX4g036619 | 4:14,149,839-14,150,000 | - | - | - | - | - | - | Detail |
| CX4g033584 | 4:14,155,693-14,155,917 | + | - | - | - | - | - | Detail |
| CX4g032228 | 4:14,167,310-14,170,241 | - | C1H4g22936 | C2H4g11650 | LOC_Os04g28280 | Os04g0350700 | AN1, An-1, OsbHLH093, RAE1, An-1/RAE1, RAE1/An-1, Awn4-2 | Detail |
| CX4g033472 | 4:14,193,425-14,194,757 | + | C1H4g25714 | C2H4g04479 | LOC_Os04g28300 | Os04g0349600 | - | Detail |
| CX4g032429 | 4:14,223,003-14,223,206 | + | - | - | - | - | - | Detail |