| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g28403 | 12:975,687-978,182 | - | C1H11g02962 | CX12g016378 | LOC_Os12g02970 | Os12g0123300 | - | Detail |
| C2H12g11883 | 12:980,543-981,606 | - | - | - | - | - | - | Detail |
| C2H12g30295 | 12:986,867-989,905 | + | C1H12g22368 | CX12g017662 | LOC_Os12g02980 | Os12g0123500 | OsAPY9 | Detail |
| C2H12g23996 | 12:993,145-998,898 | + | C1H12g05221 | CX12g017662 | LOC_Os12g02980 | Os12g0123500 | OsAPY9 | Detail |
| C2H12g07650 | 12:1,011,011-1,012,468 | - | - | - | - | - | - | Detail |
| C2H12g09367 | 12:1,016,284-1,017,810 | + | C1H12g25659 | CX12g016621 | LOC_Os12g03040 | Os12g0123700 | NAC131, ONAC131 | Detail |
| C2H12g00116 | 12:1,042,680-1,044,068 | + | C1H11g13160 | CX12g016848 | LOC_Os11g03370 | Os12g0123800 | - | Detail |
| C2H12g07694 | 12:1,047,705-1,051,656 | - | C1H12g22976 | CX12g015401 | LOC_Os12g03060 | Os12g0123900 | - | Detail |
| C2H12g12920 | 12:1,060,016-1,063,102 | - | C1H12g19027 | CX12g015071 | LOC_Os12g03100 | Os12g0124400 | - | Detail |
| C2H12g00598 | 12:1,070,970-1,073,146 | + | C1H11g12536 | CX12g015856 | LOC_Os11g03420 | Os12g0124500 | - | Detail |
| C2H12g03001 | 12:1,077,335-1,079,590 | + | C1H11g15750 | CX12g018297 | LOC_Os12g03130 | Os12g0124700 | - | Detail |
| C2H12g28075 | 12:1,091,633-1,092,662 | - | C1H12g21501 | CX12g017678 | LOC_Os12g03150 | Os12g0125000 | OsMYB60 | Detail |
| C2H12g12728 | 12:1,101,471-1,102,370 | - | C1H12g26200 | CX12g016071 | LOC_Os12g03180 | Os12g0125300 | - | Detail |
| C2H12g04503 | 12:1,109,402-1,112,962 | - | C1H12g16810 | CX12g016045 | LOC_Os12g03190 | Os12g0125400 | - | Detail |
| C2H12g11583 | 12:1,115,423-1,119,559 | - | C1H12g02357 | CX12g016734 | LOC_Os12g03200 | Os12g0125800 | - | Detail |
| C2H12g17589 | 12:1,123,399-1,126,774 | - | C1H12g15575 | CX12g016478 | LOC_Os12g03230 | Os12g0125800 | - | Detail |
| C2H12g07942 | 12:1,134,611-1,138,906 | - | C1H12g11610 | CX12g015633 | LOC_Os12g03260 | Os12g0126000 | - | Detail |
| C2H12g24280 | 12:1,145,901-1,146,823 | - | C1H12g08527 | CX12g016190 | LOC_Os11g03520 | Os12g0126100 | OsGELP115 | Detail |
| C2H12g24293 | 12:1,147,831-1,150,174 | + | C1H12g20982 | CX12g016754 | LOC_Os12g03270 | Os12g0126200 | - | Detail |
| C2H12g23067 | 12:1,150,977-1,155,934 | - | C1H12g18779 | CX12g016808 | LOC_Os12g03290 | Os12g0126300 | OsWRI1-2 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g032157 | 4:13,964,469-13,971,418 | + | C1H4g19418 | C2H4g16562 | LOC_Os04g28020 | Os04g0347800 | PRD1 | Detail |
| CX4g033951 | 4:13,979,326-13,984,578 | + | C1H4g22332 | C2H4g25578 | LOC_Os04g28040 | Os04g0347900 | - | Detail |
| CX4g033086 | 4:13,987,958-13,991,043 | + | C1H4g13797 | C2H4g20901 | LOC_Os04g28050 | Os04g0348000 | - | Detail |
| CX4g034188 | 4:13,992,645-13,995,777 | - | C1H4g24314 | C2H4g08837 | LOC_Os04g28060 | Os04g0348100 | - | Detail |
| CX4g032168 | 4:13,997,935-13,998,105 | - | - | - | - | - | - | Detail |
| CX4g035633 | 4:14,006,653-14,013,661 | + | C1H4g16463 | C2H4g13837 | LOC_Os04g28090 | Os04g0348300 | - | Detail |
| CX4g036157 | 4:14,018,330-14,021,374 | - | C1H4g18035 | C2H4g14798 | LOC_Os04g28100 | Os04g0348400 | OsPUB7 | Detail |
| CX4g033226 | 4:14,078,513-14,078,674 | + | C1H3g20268 | C2H3g21623 | - | - | - | Detail |
| CX4g035408 | 4:14,079,514-14,083,145 | - | C1H4g18144 | C2H4g00376 | LOC_Os04g28170 | Os04g0349401 | - | Detail |
| CX4g032516 | 4:14,085,235-14,087,513 | - | C1H4g07697 | C2H4g26754 | LOC_Os04g28180 | Os04g0349500 | - | Detail |
| CX4g035158 | 4:14,103,669-14,105,909 | + | C1H4g25714 | C2H4g04479 | LOC_Os04g28234 | Os04g0349600 | - | Detail |
| CX4g034310 | 4:14,109,168-14,113,966 | - | C1H4g08997 | C2H4g11001 | LOC_Os04g28210 | Os04g0349700 | - | Detail |
| CX4g034236 | 4:14,125,262-14,127,748 | + | C1H4g05397 | C2H4g17175 | LOC_Os04g28234 | Os04g0350000 | - | Detail |
| CX4g036288 | 4:14,134,572-14,135,027 | - | - | - | LOC_Os04g28250 | Os04g0350100 | - | Detail |
| CX4g035357 | 4:14,140,407-14,147,336 | + | C1H4g22441 | C2H4g23045 | LOC_Os04g28260 | Os04g0350300 | - | Detail |
| CX4g036619 | 4:14,149,839-14,150,000 | - | - | - | - | - | - | Detail |
| CX4g033584 | 4:14,155,693-14,155,917 | + | - | - | - | - | - | Detail |
| CX4g032228 | 4:14,167,310-14,170,241 | - | C1H4g22936 | C2H4g11650 | LOC_Os04g28280 | Os04g0350700 | AN1, An-1, OsbHLH093, RAE1, An-1/RAE1, RAE1/An-1, Awn4-2 | Detail |
| CX4g033472 | 4:14,193,425-14,194,757 | + | C1H4g25714 | C2H4g04479 | LOC_Os04g28300 | Os04g0349600 | - | Detail |
| CX4g032429 | 4:14,223,003-14,223,206 | + | - | - | - | - | - | Detail |