| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g19844 | 4:17,153,417-17,161,315 | - | C2H4g06643 | CX4g036045 | LOC_Os04g32880 | Os04g0401300 | - | Detail |
| C1H4g01351 | 4:17,182,271-17,187,924 | + | C2H4g23329 | CX4g035031 | LOC_Os04g32920 | Os04g0401700 | - | Detail |
| C1H4g00308 | 4:17,190,338-17,193,226 | - | C2H4g07669 | CX4g032032 | LOC_Os04g32930 | Os04g0401800 | OsSnm1 | Detail |
| C1H4g06913 | 4:17,195,511-17,202,757 | - | C2H4g08341 | CX4g033022 | LOC_Os04g32940 | Os04g0401900 | - | Detail |
| C1H4g17832 | 4:17,209,664-17,213,099 | - | C2H4g27588 | CX4g033505 | LOC_Os04g32950 | Os04g0402100 | - | Detail |
| C1H4g28962 | 4:17,217,527-17,225,945 | - | C2H4g29861 | CX4g033647 | LOC_Os04g32960 | Os04g0402200 | - | Detail |
| C1H4g29248 | 4:17,231,441-17,234,026 | + | C2H4g17148 | CX4g036231 | LOC_Os04g32970 | Os04g0402300 | - | Detail |
| C1H4g15778 | 4:17,245,410-17,246,442 | - | C2H4g06982 | CX4g035592 | LOC_Os04g32980 | Os04g0402500 | - | Detail |
| C1H4g07240 | 4:17,314,020-17,315,852 | + | C2H4g06461 | CX4g036153 | LOC_Os04g33030 | Os04g0403200 | - | Detail |
| C1H4g07835 | 4:17,326,685-17,330,588 | + | C2H4g07757 | CX4g034608 | LOC_Os04g33040 | Os04g0403300 | - | Detail |
| C1H4g10687 | 4:17,330,963-17,336,344 | + | C2H4g27026 | CX4g034506 | LOC_Os04g33050 | Os04g0403400 | - | Detail |
| C1H4g21762 | 4:17,336,861-17,340,691 | + | C2H4g06142 | CX4g033005 | LOC_Os04g33060 | Os04g0403500 | - | Detail |
| C1H4g16707 | 4:17,342,283-17,346,385 | - | C2H4g05650 | CX4g036347 | LOC_Os04g33080 | Os04g0403701 | - | Detail |
| C1H4g29160 | 4:17,361,082-17,361,786 | - | C2H4g08188 | CX4g031400 | LOC_Os04g33110 | Os04g0403900 | - | Detail |
| C1H4g22277 | 4:17,365,425-17,366,098 | - | C2H4g05726 | CX4g033687 | - | - | - | Detail |
| C1H4g01070 | 4:17,368,879-17,370,036 | - | C2H4g02595 | CX4g032114 | LOC_Os04g33150 | Os04g0404400 | TRD4.2 | Detail |
| C1H4g19552 | 4:17,381,677-17,386,633 | + | C2H4g12964 | CX4g035122 | LOC_Os04g33190 | Os04g0404800 | - | Detail |
| C1H4g09341 | 4:17,387,378-17,395,850 | - | C2H4g17158 | CX4g034399 | LOC_Os04g33200 | Os04g0404900 | - | Detail |
| C1H4g00203 | 4:17,400,093-17,405,282 | + | C2H4g18122 | CX4g034889 | LOC_Os04g33210 | Os04g0405000 | - | Detail |
| C1H4g26027 | 4:17,406,061-17,408,732 | - | C2H4g07819 | CX4g033742 | LOC_Os04g33220 | Os04g0405100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g007049 | 1:19,362,354-19,362,854 | - | C1H1g23185 | - | LOC_Os01g38490 | Os01g0565650 | - | Detail |
| CX1g004835 | 1:19,363,776-19,364,477 | + | C1H1g00748 | C2H1g27995 | LOC_Os01g42520 | Os01g0611000 | - | Detail |
| CX1g003543 | 1:19,365,734-19,367,439 | - | C1H1g06422 | C2H1g19973 | LOC_Os01g38500 | Os01g0565800 | - | Detail |
| CX1g000001 | 1:19,370,935-19,371,900 | + | - | - | LOC_Os01g38520 | Os01g0566000 | - | Detail |
| CX1g005683 | 1:19,374,228-19,379,859 | - | C1H1g16023 | C2H1g30274 | LOC_Os01g38530 | Os01g0566100 | OsELF3.2, ELF3_chr.1, OsELF3-2 | Detail |
| CX1g001446 | 1:19,378,421-19,378,582 | + | - | - | - | Os02g0184100 | - | Detail |
| CX1g003869 | 1:19,385,876-19,386,196 | - | - | - | - | Os01g0566200 | - | Detail |
| CX1g000412 | 1:19,389,905-19,392,349 | - | C1H1g13897 | C2H1g05106 | LOC_Os01g38580 | Os01g0566500 | - | Detail |
| CX1g000948 | 1:19,411,600-19,412,859 | - | C1H1g12779 | C2H1g23392 | LOC_Os01g38610 | Os01g0566800 | - | Detail |
| CX1g003127 | 1:19,423,561-19,430,041 | - | C1H1g22416 | C2H1g12854 | LOC_Os01g38620 | Os01g0566900 | - | Detail |
| CX1g003570 | 1:19,437,817-19,438,254 | - | C1H1g14571 | - | LOC_Os01g38660 | Os01g0567400 | - | Detail |
| CX1g006382 | 1:19,442,115-19,444,108 | + | C1H1g20878 | C2H1g22209 | LOC_Os01g38670 | Os01g0567500 | OsMST8 | Detail |
| CX1g003104 | 1:19,446,163-19,448,024 | - | C1H1g27966 | C2H1g08093 | LOC_Os01g38680 | Os01g0567600 | OsMST7, OsSTP7 | Detail |
| CX1g002346 | 1:19,473,458-19,474,039 | - | - | - | - | - | - | Detail |
| CX1g000378 | 1:19,477,716-19,477,877 | - | - | - | - | - | - | Detail |
| CX1g005595 | 1:19,493,256-19,493,549 | + | C1H11g18981 | C2H11g12950 | - | - | - | Detail |
| CX1g002815 | 1:19,496,640-19,502,286 | - | C1H1g10384 | C2H1g28975 | LOC_Os01g38850 | Os01g0568400 | Gnk2RLK-3 | Detail |
| CX1g005940 | 1:19,512,084-19,514,719 | - | C1H9g03429 | C2H9g30434 | LOC_Os01g46100 | - | - | Detail |
| CX1g006699 | 1:19,516,575-19,519,355 | + | C1H1g11385 | C2H1g22055 | LOC_Os01g38880 | Os01g0569200 | - | Detail |
| CX1g001343 | 1:19,522,757-19,526,113 | - | - | - | - | - | - | Detail |