| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g28046 | 12:12,223,758-12,226,091 | - | - | CX12g015966 | LOC_Os12g24330 | Os12g0431300 | - | Detail |
| C1H12g16885 | 12:12,240,341-12,242,141 | + | C2H12g16529 | CX12g018511 | LOC_Os12g24390 | Os12g0431700 | - | Detail |
| C1H12g31271 | 12:12,261,135-12,262,103 | - | C2H12g01862 | CX12g015483 | LOC_Os12g24140 | Os12g0432000 | - | Detail |
| C1H12g09328 | 12:12,299,852-12,300,409 | + | C2H12g10767 | CX12g017108 | LOC_Os12g24490 | Os12g0432600 | - | Detail |
| C1H12g17763 | 12:12,320,549-12,321,667 | - | - | - | - | - | - | Detail |
| C1H12g01818 | 12:12,334,770-12,342,916 | - | C2H12g22841 | CX12g016145 | LOC_Os12g24540 | Os12g0433200 | - | Detail |
| C1H12g23644 | 12:12,348,647-12,360,635 | - | C2H12g15618 | CX12g016494 | LOC_Os12g24550 | Os12g0433500 | - | Detail |
| C1H12g14351 | 12:12,369,190-12,371,519 | + | C2H12g05476 | - | LOC_Os12g24580 | Os12g0433700 | - | Detail |
| C1H12g23524 | 12:12,426,868-12,432,465 | + | C2H12g01529 | CX12g015536 | LOC_Os12g24650 | Os12g0434400 | - | Detail |
| C1H12g19273 | 12:12,517,610-12,520,527 | - | C2H12g00049 | CX12g018731 | LOC_Os12g24800 | Os12g0435200 | OsCCD4b | Detail |
| C1H12g05019 | 12:12,569,864-12,570,082 | - | C2H12g11113 | CX12g015912 | - | Os12g0548401 | - | Detail |
| C1H12g22930 | 12:12,583,474-12,584,084 | - | C2H12g23339 | CX12g016320 | LOC_Os12g25120 | Os12g0438000 | - | Detail |
| C1H12g20658 | 12:12,589,815-12,590,260 | - | C2H12g21121 | CX12g017421 | LOC_Os12g25130 | Os12g0438100 | - | Detail |
| C1H12g03456 | 12:12,628,202-12,629,902 | + | C2H12g19954 | CX12g015850 | LOC_Os12g25170 | Os12g0438300 | - | Detail |
| C1H12g23538 | 12:12,632,212-12,634,841 | + | C2H12g19954 | CX12g015850 | LOC_Os12g25180 | Os12g0438400 | - | Detail |
| C1H12g00042 | 12:12,695,178-12,698,618 | - | C2H12g29393 | CX12g018260 | LOC_Os12g25200 | Os12g0438600 | - | Detail |
| C1H12g27556 | 12:12,709,992-12,710,282 | - | C2H12g10340 | - | LOC_Os12g25210 | Os12g0438900 | - | Detail |
| C1H12g10711 | 12:12,915,027-12,916,445 | + | - | - | LOC_Os09g04680 | - | - | Detail |
| C1H12g03044 | 12:12,918,225-12,920,540 | - | C2H12g16836 | CX12g018024 | LOC_Os12g25450 | Os12g0441300 | OsASMT18 | Detail |
| C1H12g28305 | 12:12,954,451-12,956,333 | - | C2H12g23920 | CX12g016162 | LOC_Os12g25490 | Os12g0441600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g007049 | 1:19,362,354-19,362,854 | - | C1H1g23185 | - | LOC_Os01g38490 | Os01g0565650 | - | Detail |
| CX1g004835 | 1:19,363,776-19,364,477 | + | C1H1g00748 | C2H1g27995 | LOC_Os01g42520 | Os01g0611000 | - | Detail |
| CX1g003543 | 1:19,365,734-19,367,439 | - | C1H1g06422 | C2H1g19973 | LOC_Os01g38500 | Os01g0565800 | - | Detail |
| CX1g000001 | 1:19,370,935-19,371,900 | + | - | - | LOC_Os01g38520 | Os01g0566000 | - | Detail |
| CX1g005683 | 1:19,374,228-19,379,859 | - | C1H1g16023 | C2H1g30274 | LOC_Os01g38530 | Os01g0566100 | OsELF3.2, ELF3_chr.1, OsELF3-2 | Detail |
| CX1g001446 | 1:19,378,421-19,378,582 | + | - | - | - | Os02g0184100 | - | Detail |
| CX1g003869 | 1:19,385,876-19,386,196 | - | - | - | - | Os01g0566200 | - | Detail |
| CX1g000412 | 1:19,389,905-19,392,349 | - | C1H1g13897 | C2H1g05106 | LOC_Os01g38580 | Os01g0566500 | - | Detail |
| CX1g000948 | 1:19,411,600-19,412,859 | - | C1H1g12779 | C2H1g23392 | LOC_Os01g38610 | Os01g0566800 | - | Detail |
| CX1g003127 | 1:19,423,561-19,430,041 | - | C1H1g22416 | C2H1g12854 | LOC_Os01g38620 | Os01g0566900 | - | Detail |
| CX1g003570 | 1:19,437,817-19,438,254 | - | C1H1g14571 | - | LOC_Os01g38660 | Os01g0567400 | - | Detail |
| CX1g006382 | 1:19,442,115-19,444,108 | + | C1H1g20878 | C2H1g22209 | LOC_Os01g38670 | Os01g0567500 | OsMST8 | Detail |
| CX1g003104 | 1:19,446,163-19,448,024 | - | C1H1g27966 | C2H1g08093 | LOC_Os01g38680 | Os01g0567600 | OsMST7, OsSTP7 | Detail |
| CX1g002346 | 1:19,473,458-19,474,039 | - | - | - | - | - | - | Detail |
| CX1g000378 | 1:19,477,716-19,477,877 | - | - | - | - | - | - | Detail |
| CX1g005595 | 1:19,493,256-19,493,549 | + | C1H11g18981 | C2H11g12950 | - | - | - | Detail |
| CX1g002815 | 1:19,496,640-19,502,286 | - | C1H1g10384 | C2H1g28975 | LOC_Os01g38850 | Os01g0568400 | Gnk2RLK-3 | Detail |
| CX1g005940 | 1:19,512,084-19,514,719 | - | C1H9g03429 | C2H9g30434 | LOC_Os01g46100 | - | - | Detail |
| CX1g006699 | 1:19,516,575-19,519,355 | + | C1H1g11385 | C2H1g22055 | LOC_Os01g38880 | Os01g0569200 | - | Detail |
| CX1g001343 | 1:19,522,757-19,526,113 | - | - | - | - | - | - | Detail |