| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g10905 | 12:3,940,550-3,941,078 | + | - | - | - | Os12g0188566 | - | Detail |
| C1H12g30014 | 12:3,942,146-3,942,975 | + | C2H12g12412 | - | - | - | - | Detail |
| C1H12g05241 | 12:3,942,977-3,948,556 | + | C2H12g21980 | CX12g017298 | LOC_Os12g08740 | Os12g0188900 | - | Detail |
| C1H12g21808 | 12:3,946,973-3,947,506 | - | C2H12g01844 | CX12g017024 | - | Os12g0189100 | - | Detail |
| C1H12g16915 | 12:3,980,398-3,984,683 | + | C2H12g01367 | CX12g015280 | LOC_Os12g08760 | Os12g0189300 | - | Detail |
| C1H12g28974 | 12:3,986,862-3,987,762 | + | C2H12g03276 | CX12g018701 | LOC_Os12g08770 | Os12g0189400 | - | Detail |
| C1H12g04629 | 12:3,997,749-3,999,528 | - | C2H12g01795 | CX12g017300 | LOC_Os12g08780 | Os12g0189500 | OsYUC11, YUCCA11 | Detail |
| C1H12g25775 | 12:4,021,234-4,025,059 | + | C2H12g08940 | CX12g018088 | LOC_Os12g08800 | Os12g0189900 | - | Detail |
| C1H12g13538 | 12:4,025,561-4,029,769 | - | C2H12g15639 | CX12g017476 | LOC_Os12g08810 | Os12g0190000 | - | Detail |
| C1H12g06109 | 12:4,042,562-4,047,869 | + | C2H12g19857 | CX12g015669 | LOC_Os12g08820 | Os12g0190100 | - | Detail |
| C1H12g18735 | 12:4,047,979-4,049,541 | - | C2H12g19884 | CX12g016118 | LOC_Os12g08830 | Os12g0190200 | - | Detail |
| C1H12g28925 | 12:4,068,012-4,071,065 | - | C2H12g19779 | CX12g016245 | LOC_Os12g08850 | Os12g0190400 | - | Detail |
| C1H12g03417 | 12:4,105,045-4,107,644 | + | C2H12g16869 | CX12g016877 | LOC_Os12g08900 | Os12g0191300 | - | Detail |
| C1H12g08391 | 12:4,114,054-4,115,322 | - | C2H12g24855 | CX12g018491 | LOC_Os12g08920 | Os12g0191500 | - | Detail |
| C1H12g22853 | 12:4,158,792-4,163,129 | + | C2H12g23890 | CX12g017759 | LOC_Os12g09000 | Os12g0192500 | - | Detail |
| C1H12g04899 | 12:4,196,929-4,197,375 | + | C2H12g18630 | CX12g017759 | LOC_Os12g09000 | - | - | Detail |
| C1H12g19513 | 12:4,247,018-4,250,051 | - | C2H12g03943 | - | LOC_Os12g09060 | - | - | Detail |
| C1H12g16068 | 12:4,268,075-4,273,405 | + | C2H12g02493 | CX12g016460 | LOC_Os12g09320 | Os12g0181600 | OsAAP15 | Detail |
| C1H12g03375 | 12:4,278,914-4,282,601 | - | C2H12g13234 | CX12g015659 | LOC_Os12g09300 | Os12g0194900 | OsAAP4, OsAAP4a | Detail |
| C1H12g16559 | 12:4,290,781-4,299,040 | - | C2H12g01465 | CX12g017686 | LOC_Os12g09290 | Os12g0194800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g007049 | 1:19,362,354-19,362,854 | - | C1H1g23185 | - | LOC_Os01g38490 | Os01g0565650 | - | Detail |
| CX1g004835 | 1:19,363,776-19,364,477 | + | C1H1g00748 | C2H1g27995 | LOC_Os01g42520 | Os01g0611000 | - | Detail |
| CX1g003543 | 1:19,365,734-19,367,439 | - | C1H1g06422 | C2H1g19973 | LOC_Os01g38500 | Os01g0565800 | - | Detail |
| CX1g000001 | 1:19,370,935-19,371,900 | + | - | - | LOC_Os01g38520 | Os01g0566000 | - | Detail |
| CX1g005683 | 1:19,374,228-19,379,859 | - | C1H1g16023 | C2H1g30274 | LOC_Os01g38530 | Os01g0566100 | OsELF3.2, ELF3_chr.1, OsELF3-2 | Detail |
| CX1g001446 | 1:19,378,421-19,378,582 | + | - | - | - | Os02g0184100 | - | Detail |
| CX1g003869 | 1:19,385,876-19,386,196 | - | - | - | - | Os01g0566200 | - | Detail |
| CX1g000412 | 1:19,389,905-19,392,349 | - | C1H1g13897 | C2H1g05106 | LOC_Os01g38580 | Os01g0566500 | - | Detail |
| CX1g000948 | 1:19,411,600-19,412,859 | - | C1H1g12779 | C2H1g23392 | LOC_Os01g38610 | Os01g0566800 | - | Detail |
| CX1g003127 | 1:19,423,561-19,430,041 | - | C1H1g22416 | C2H1g12854 | LOC_Os01g38620 | Os01g0566900 | - | Detail |
| CX1g003570 | 1:19,437,817-19,438,254 | - | C1H1g14571 | - | LOC_Os01g38660 | Os01g0567400 | - | Detail |
| CX1g006382 | 1:19,442,115-19,444,108 | + | C1H1g20878 | C2H1g22209 | LOC_Os01g38670 | Os01g0567500 | OsMST8 | Detail |
| CX1g003104 | 1:19,446,163-19,448,024 | - | C1H1g27966 | C2H1g08093 | LOC_Os01g38680 | Os01g0567600 | OsMST7, OsSTP7 | Detail |
| CX1g002346 | 1:19,473,458-19,474,039 | - | - | - | - | - | - | Detail |
| CX1g000378 | 1:19,477,716-19,477,877 | - | - | - | - | - | - | Detail |
| CX1g005595 | 1:19,493,256-19,493,549 | + | C1H11g18981 | C2H11g12950 | - | - | - | Detail |
| CX1g002815 | 1:19,496,640-19,502,286 | - | C1H1g10384 | C2H1g28975 | LOC_Os01g38850 | Os01g0568400 | Gnk2RLK-3 | Detail |
| CX1g005940 | 1:19,512,084-19,514,719 | - | C1H9g03429 | C2H9g30434 | LOC_Os01g46100 | - | - | Detail |
| CX1g006699 | 1:19,516,575-19,519,355 | + | C1H1g11385 | C2H1g22055 | LOC_Os01g38880 | Os01g0569200 | - | Detail |
| CX1g001343 | 1:19,522,757-19,526,113 | - | - | - | - | - | - | Detail |