| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g21742 | 12:7,953,738-7,957,203 | - | C1H12g23481 | CX12g016666 | LOC_Os12g16250 | Os12g0263600 | - | Detail |
| C2H12g09837 | 12:7,965,840-7,966,673 | - | C1H12g19638 | CX12g016756 | - | - | - | Detail |
| C2H12g28081 | 12:7,968,856-7,969,194 | + | - | CX12g018545 | LOC_Os02g35120 | Os06g0629362 | - | Detail |
| C2H12g05917 | 12:7,982,822-7,985,891 | - | C1H12g31185 | CX12g016907 | LOC_Os12g16520 | Os12g0614851 | - | Detail |
| C2H12g24177 | 12:7,993,537-7,994,355 | - | C1H12g05455 | CX12g018590 | LOC_Os12g16540 | Os12g0266200 | - | Detail |
| C2H12g24213 | 12:7,994,387-7,995,226 | - | C1H12g12669 | CX12g016989 | LOC_Os12g16540 | Os12g0266200 | - | Detail |
| C2H12g15577 | 12:8,037,335-8,039,673 | + | C1H12g30337 | CX12g015656 | - | - | - | Detail |
| C2H12g13855 | 12:8,065,465-8,065,944 | - | - | CX12g015139 | - | - | - | Detail |
| C2H12g13804 | 12:8,066,709-8,067,195 | + | C1H12g12690 | CX12g016493 | LOC_Os12g16640 | Os12g0267100 | - | Detail |
| C2H12g25263 | 12:8,070,111-8,081,634 | + | C1H12g04576 | CX12g016493 | LOC_Os12g16650 | Os12g0267200 | - | Detail |
| C2H12g29205 | 12:8,085,928-8,086,371 | + | C1H12g26358 | CX12g015504 | LOC_Os12g16670 | Os12g0267500 | - | Detail |
| C2H12g22341 | 12:8,096,868-8,097,109 | + | C1H12g24303 | CX12g017950 | LOC_Os12g16370 | - | - | Detail |
| C2H12g01086 | 12:8,101,650-8,104,551 | + | C1H12g20439 | CX12g016003 | LOC_Os12g16690 | Os12g0267900 | - | Detail |
| C2H12g04535 | 12:8,117,029-8,118,986 | - | C1H12g24834 | CX12g018224 | LOC_Os12g16720 | Os12g0268000 | SL, OsSL, CYP71P1, LLM1, CYP71A1, T5H | Detail |
| C2H12g04709 | 12:8,195,949-8,200,053 | - | C1H12g27646 | CX12g016443 | LOC_Os12g17070 | Os12g0270100 | - | Detail |
| C2H12g27718 | 12:8,205,451-8,207,208 | + | C1H12g23758 | CX12g015910 | LOC_Os12g17080 | Os12g0270200 | OGR1, ogr1 | Detail |
| C2H12g03089 | 12:8,213,300-8,218,084 | - | C1H12g00865 | CX12g016852 | LOC_Os12g17090 | Os12g0270300 | - | Detail |
| C2H12g11132 | 12:8,238,815-8,241,615 | - | C1H12g07805 | CX12g018649 | LOC_Os12g17090 | Os12g0270300 | - | Detail |
| C2H12g14706 | 12:8,247,114-8,250,863 | - | C1H12g17449 | CX12g017972 | LOC_Os12g17160 | Os12g0270900 | - | Detail |
| C2H12g04129 | 12:8,266,886-8,267,263 | - | - | CX12g018058 | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g034917 | 4:13,484,308-13,484,666 | - | - | C2H12g13956 | - | - | - | Detail |
| CX4g036012 | 4:13,489,141-13,494,093 | + | C1H4g09628 | C2H4g16024 | LOC_Os04g27670 | Os04g0344100 | - | Detail |
| CX4g034362 | 4:13,530,364-13,530,573 | + | - | - | - | Os01g0111300 | - | Detail |
| CX4g036445 | 4:13,533,497-13,533,893 | + | - | - | - | Os07g0450100 | - | Detail |
| CX4g035619 | 4:13,540,968-13,544,027 | + | C1H4g29227 | C2H4g17478 | LOC_Os04g27020 | Os04g0178400 | CYP99A3 | Detail |
| CX4g032815 | 4:13,551,464-13,555,248 | + | C1H4g26057 | C2H4g26112 | LOC_Os04g27060 | Os04g0339400 | OsAKR1 | Detail |
| CX4g031945 | 4:13,557,492-13,562,139 | - | C1H4g31520 | C2H4g17594 | LOC_Os04g27670 | Os04g0344100 | - | Detail |
| CX4g032396 | 4:13,567,406-13,568,770 | - | C1H5g19633 | C2H4g29979 | - | - | - | Detail |
| CX4g033901 | 4:13,584,719-13,591,544 | - | C1H4g16337 | C2H4g19529 | LOC_Os04g27096 | Os04g0339800 | - | Detail |
| CX4g034705 | 4:13,594,853-13,595,110 | + | C1H4g19562 | C2H4g26112 | LOC_Os04g27060 | Os04g0341100 | - | Detail |
| CX4g033674 | 4:13,600,306-13,612,059 | - | C1H4g19050 | C2H4g09454 | LOC_Os04g27790 | Os04g0340300 | OsTPS19 | Detail |
| CX4g031534 | 4:13,623,070-13,623,249 | - | - | - | - | - | - | Detail |
| CX4g034457 | 4:13,635,653-13,640,240 | - | C1H4g20792 | C2H4g13731 | LOC_Os04g27790 | Os04g0345400 | - | Detail |
| CX4g034334 | 4:13,686,228-13,692,546 | - | C1H4g10592 | C2H4g01920 | LOC_Os04g27790 | Os04g0345400 | - | Detail |
| CX4g036648 | 4:13,695,806-13,696,177 | - | - | - | - | Os04g0343050 | - | Detail |
| CX4g032648 | 4:13,721,423-13,725,031 | + | C1H3g20653 | C2H2g00568 | LOC_Os04g28650 | Os04g0330900 | - | Detail |
| CX4g035836 | 4:13,728,204-13,732,008 | - | C1H4g05931 | C2H4g08098 | LOC_Os04g27670 | Os04g0344100 | - | Detail |
| CX4g034494 | 4:13,757,256-13,761,773 | - | C1H4g14729 | C2H4g22506 | LOC_Os04g27720 | Os04g0344400 | - | Detail |
| CX4g033331 | 4:13,770,559-13,770,900 | + | - | C2H4g01148 | LOC_Os04g27750 | - | - | Detail |
| CX4g033401 | 4:13,778,134-13,781,638 | - | C1H4g17656 | C2H4g16931 | LOC_Os04g27790 | Os04g0345400 | - | Detail |