| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g09802 | 1:27,367,711-27,375,588 | + | C2H1g19534 | CX1g004251 | LOC_Os01g53294 | Os01g0734200 | OsRbohA, OsNOX2 | Detail |
| C1H1g03864 | 1:27,377,917-27,378,810 | - | - | CX1g001402 | - | - | - | Detail |
| C1H1g16727 | 1:27,390,048-27,391,484 | + | C2H1g09241 | CX1g003337 | LOC_Os01g53350 | Os01g0734800 | - | Detail |
| C1H1g17596 | 1:27,402,036-27,403,511 | + | C2H1g27577 | CX1g000021 | LOC_Os01g53370 | Os01g0735300 | - | Detail |
| C1H1g12410 | 1:27,423,630-27,425,060 | - | C2H1g28000 | CX1g004334 | LOC_Os01g53420 | Os01g0735900 | - | Detail |
| C1H1g11199 | 1:27,430,155-27,431,579 | - | C2H1g03039 | CX1g005230 | LOC_Os01g53430 | Os01g0736100 | - | Detail |
| C1H1g10989 | 1:27,439,124-27,440,539 | - | C2H1g19693 | CX1g005230 | LOC_Os01g53460 | Os01g0736300 | OsUGT706D1 | Detail |
| C1H1g04228 | 1:27,440,820-27,444,367 | + | C2H1g23129 | CX1g005942 | LOC_Os01g53450 | Os01g0736400 | - | Detail |
| C1H1g11257 | 1:27,445,725-27,446,477 | + | C2H1g09664 | CX1g003434 | LOC_Os01g53470 | Os01g0736500 | - | Detail |
| C1H1g18188 | 1:27,461,175-27,463,166 | + | C2H1g22559 | CX1g003962 | LOC_Os01g53520 | Os01g0736900 | - | Detail |
| C1H1g17501 | 1:27,473,848-27,479,224 | + | C2H1g29848 | CX1g006682 | LOC_Os01g53560 | Os01g0737300 | - | Detail |
| C1H1g26053 | 1:27,485,298-27,487,538 | + | C2H1g23141 | CX1g007234 | LOC_Os01g53570 | Os01g0737500 | - | Detail |
| C1H1g28789 | 1:27,493,976-27,494,602 | + | C2H1g28481 | CX1g001301 | LOC_Os01g53590 | Os01g0737700 | - | Detail |
| C1H1g20246 | 1:27,496,365-27,500,643 | - | C2H1g06822 | CX1g004371 | LOC_Os01g53600 | Os01g0737800 | OsERA1, OsERA1.1, OsPFT-β | Detail |
| C1H1g10368 | 1:27,500,714-27,504,048 | + | C2H1g22933 | CX1g003960 | LOC_Os01g53610 | Os01g0737900 | DYW3 | Detail |
| C1H1g29380 | 1:27,505,981-27,507,556 | + | C2H1g30197 | CX1g007226 | LOC_Os01g53620 | Os01g0738000 | - | Detail |
| C1H1g12561 | 1:27,508,849-27,516,184 | - | C2H1g26273 | CX1g002866 | LOC_Os01g53630 | Os01g0738100 | - | Detail |
| C1H1g20235 | 1:27,533,651-27,540,451 | + | C2H1g06044 | CX1g000101 | LOC_Os01g53640 | Os01g0738300 | - | Detail |
| C1H1g20301 | 1:27,548,869-27,552,506 | + | C2H1g19036 | CX1g001943 | LOC_Os01g53660 | Os01g0738500 | - | Detail |
| C1H1g10504 | 1:27,553,198-27,556,755 | + | C2H1g22385 | CX1g000533 | LOC_Os01g53670 | Os01g0738600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g034738 | 4:12,901,289-12,901,642 | - | C1H6g11744 | C2H4g20285 | LOC_Os04g25160 | Os04g0317500 | - | Detail |
| CX4g033192 | 4:12,904,484-12,904,633 | + | - | - | - | - | - | Detail |
| CX4g034660 | 4:12,924,774-12,925,127 | - | C1H6g11744 | C2H4g20285 | LOC_Os04g25190 | Os04g0317800 | - | Detail |
| CX4g034352 | 4:12,941,489-12,941,734 | - | - | - | - | - | - | Detail |
| CX4g032765 | 4:12,967,771-12,968,548 | - | C1H6g08206 | - | - | - | - | Detail |
| CX4g031643 | 4:12,979,058-12,979,495 | - | - | - | - | - | - | Detail |
| CX4g034682 | 4:12,994,899-12,995,321 | - | - | - | - | - | - | Detail |
| CX4g032327 | 4:13,036,250-13,037,761 | + | C1H4g01135 | C2H4g27440 | LOC_Os04g24850 | Os04g0319700 | - | Detail |
| CX4g036582 | 4:13,047,184-13,048,698 | + | C1H4g27404 | C2H4g14364 | LOC_Os04g24850 | Os04g0319800 | - | Detail |
| CX4g034067 | 4:13,049,453-13,058,341 | - | C1H4g11765 | C2H4g16249 | LOC_Os04g25960 | Os04g0320000 | - | Detail |
| CX4g034663 | 4:13,066,575-13,071,613 | + | C1H4g08601 | C2H4g13198 | LOC_Os04g25400 | Os04g0320100 | OsHCAR | Detail |
| CX4g033316 | 4:13,072,799-13,075,998 | - | C1H4g12613 | C2H4g23070 | LOC_Os04g25410 | Os04g0320200 | - | Detail |
| CX4g032409 | 4:13,092,534-13,092,805 | + | - | - | - | - | - | Detail |
| CX4g035640 | 4:13,095,176-13,095,493 | + | - | - | - | - | - | Detail |
| CX4g032890 | 4:13,100,405-13,100,665 | - | - | - | - | - | - | Detail |
| CX4g036503 | 4:13,101,346-13,102,916 | - | C1H4g07570 | C2H4g15158 | LOC_Os04g24850 | Os04g0320700 | - | Detail |
| CX4g034511 | 4:13,113,086-13,115,194 | + | C1H4g16139 | C2H4g21449 | LOC_Os04g24850 | Os04g0320700 | - | Detail |
| CX4g035140 | 4:13,117,168-13,117,377 | + | - | - | - | Os04g0294812 | - | Detail |
| CX4g035636 | 4:13,120,992-13,121,624 | - | - | - | - | - | - | Detail |
| CX4g034960 | 4:13,125,662-13,127,575 | + | C1H4g05580 | C2H4g08941 | LOC_Os04g25540 | Os04g0321500 | mtRPL27a, S28 | Detail |