| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g03833 | 2:22,338,837-22,339,826 | + | C1H2g26501 | CX2g021064 | LOC_Os02g39510 | Os02g0608000 | - | Detail |
| C2H2g27723 | 2:22,343,441-22,343,740 | - | - | CX2g024359 | - | - | - | Detail |
| C2H2g15229 | 2:22,343,451-22,348,948 | + | C1H2g11368 | CX2g022691 | LOC_Os02g39520 | Os02g0608100 | - | Detail |
| C2H2g28600 | 2:22,350,912-22,355,586 | + | C1H2g01417 | CX2g022691 | LOC_Os02g39540 | Os02g0608300 | - | Detail |
| C2H2g19218 | 2:22,356,249-22,364,819 | - | C1H2g14033 | CX2g023818 | LOC_Os02g39550 | Os02g0608400 | - | Detail |
| C2H2g21219 | 2:22,367,449-22,372,534 | - | C1H2g07169 | CX2g019746 | LOC_Os02g39560 | Os02g0608500 | - | Detail |
| C2H2g15416 | 2:22,378,106-22,382,651 | + | C1H2g27696 | CX2g023427 | LOC_Os02g39570 | Os02g0608600 | - | Detail |
| C2H2g09233 | 2:22,383,327-22,384,732 | + | C1H2g24103 | CX2g024711 | LOC_Os02g39580 | Os02g0608700 | - | Detail |
| C2H2g25183 | 2:22,385,321-22,386,535 | - | C1H2g09025 | CX2g022288 | LOC_Os02g39590 | Os02g0608801 | - | Detail |
| C2H2g23083 | 2:22,386,767-22,390,408 | - | C1H2g09645 | CX2g022666 | LOC_Os02g39600 | Os02g0608900 | - | Detail |
| C2H2g27168 | 2:22,392,213-22,392,501 | - | - | CX2g022931 | - | Os02g0609000 | - | Detail |
| C2H2g21957 | 2:22,396,830-22,397,376 | + | C1H2g17784 | CX2g023597 | LOC_Os02g39620 | Os02g0609200 | - | Detail |
| C2H2g00868 | 2:22,400,458-22,404,329 | + | C1H2g26038 | CX2g020649 | LOC_Os02g38750 | Os02g0609400 | - | Detail |
| C2H2g11617 | 2:22,408,184-22,436,863 | - | C1H2g11633 | CX2g018908 | LOC_Os02g39650 | Os02g0609800 | - | Detail |
| C2H2g09655 | 2:22,443,036-22,444,831 | + | C1H2g00379 | CX2g024892 | LOC_Os02g39660 | Os02g0609900 | - | Detail |
| C2H2g15841 | 2:22,449,894-22,452,140 | - | C1H2g19689 | CX2g024076 | - | - | - | Detail |
| C2H2g06477 | 2:22,452,360-22,457,022 | - | C1H2g08707 | CX2g022639 | LOC_Os02g39700 | Os02g0610400 | OsLa2 | Detail |
| C2H2g27849 | 2:22,460,565-22,461,980 | + | C1H2g23212 | CX2g019616 | LOC_Os02g39710 | Os02g0610500 | OsCOL4, OsD, OsBBX5, OsCOL4/OsD, OsCCT06 | Detail |
| C2H2g05935 | 2:22,463,243-22,467,037 | - | C1H2g29771 | CX2g023464 | LOC_Os02g39720 | Os02g0610600 | OsRSZ23 | Detail |
| C2H2g27375 | 2:22,468,956-22,471,214 | - | C1H2g12677 | CX2g019261 | LOC_Os02g39730 | Os02g0610700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g032076 | 4:12,067,500-12,069,685 | - | C1H4g26434 | C2H4g28282 | LOC_Os04g23700 | Os04g0303100 | SDRLK-24 | Detail |
| CX4g034370 | 4:12,084,884-12,087,394 | - | C1H4g26434 | C2H4g16095 | LOC_Os04g23760 | Os04g0303100 | SDRLK-24 | Detail |
| CX4g033015 | 4:12,090,004-12,092,095 | + | C1H4g21824 | C2H4g05430 | LOC_Os04g23820 | Os04g0303900 | - | Detail |
| CX4g035976 | 4:12,092,788-12,097,896 | - | C1H4g20117 | C2H4g23748 | LOC_Os04g23830 | Os04g0303950 | - | Detail |
| CX4g033018 | 4:12,104,831-12,106,942 | - | C1H4g14531 | C2H4g14626 | LOC_Os04g23849 | Os04g0304000 | - | Detail |
| CX4g031770 | 4:12,116,700-12,116,849 | + | - | - | LOC_Os12g33650 | Os11g0476333 | - | Detail |
| CX4g032002 | 4:12,123,960-12,135,329 | - | C1H4g03483 | C2H4g21835 | LOC_Os04g23890 | Os04g0304200 | PHOT2, OsPHOT2, OsNPH1b | Detail |
| CX4g035769 | 4:12,151,820-12,152,110 | - | - | - | - | - | - | Detail |
| CX4g031448 | 4:12,158,093-12,158,323 | + | - | - | - | - | - | Detail |
| CX4g034278 | 4:12,167,717-12,169,827 | + | C1H4g29080 | C2H4g30545 | LOC_Os04g23910 | Os04g0304400 | OsMADS25 | Detail |
| CX4g032911 | 4:12,177,015-12,177,377 | + | - | - | - | - | - | Detail |
| CX4g033236 | 4:12,186,171-12,187,387 | + | - | - | LOC_Os04g24110 | Os04g0305700 | - | Detail |
| CX4g034384 | 4:12,189,405-12,189,626 | - | - | - | LOC_Os12g31485 | Os10g0399901 | - | Detail |
| CX4g035152 | 4:12,226,568-12,227,386 | + | - | - | LOC_Os04g24140 | Os04g0306400 | - | Detail |
| CX4g034796 | 4:12,236,097-12,236,312 | + | - | - | - | Os02g0188201 | - | Detail |
| CX4g035750 | 4:12,239,380-12,239,964 | - | C1H4g25334 | C2H4g10003 | - | Os04g0306750 | - | Detail |
| CX4g032718 | 4:12,241,890-12,251,031 | - | C1H4g25334 | C2H4g08480 | LOC_Os04g24170 | Os04g0306800 | - | Detail |
| CX4g033768 | 4:12,257,387-12,263,038 | + | C1H4g27699 | C2H4g09830 | LOC_Os04g24180 | Os04g0307200 | - | Detail |
| CX4g034746 | 4:12,272,686-12,278,512 | - | C1H4g04495 | C2H4g23571 | LOC_Os09g01375 | Os04g0206200 | - | Detail |
| CX4g035129 | 4:12,314,951-12,319,392 | + | C1H4g00825 | C2H4g00695 | LOC_Os04g24300 | Os04g0308100 | - | Detail |