| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H11g00486 | 11:2,852,157-2,852,627 | - | C2H11g14668 | CX11g014717 | LOC_Os11g06990 | Os11g0619500 | - | Detail |
| C1H11g14391 | 11:2,853,395-2,854,709 | - | C2H11g14668 | CX11g014717 | LOC_Os11g06990 | Os11g0618500 | - | Detail |
| C1H11g02887 | 11:2,876,129-2,878,966 | + | C2H11g20177 | CX11g010973 | LOC_Os11g07000 | Os11g0171100 | - | Detail |
| C1H11g21973 | 11:2,888,535-2,891,620 | - | C2H11g20553 | CX11g011009 | LOC_Os11g07020 | Os11g0171300 | - | Detail |
| C1H11g09155 | 11:2,893,290-2,894,753 | - | C2H11g00926 | CX11g012638 | LOC_Os11g07030 | Os11g0171400 | - | Detail |
| C1H11g09618 | 11:2,895,055-2,899,952 | - | C2H11g09510 | CX11g013844 | LOC_Os11g07040 | Os11g0171500 | CDPK24, OsCDPK14, OsCPK24 | Detail |
| C1H11g05971 | 11:2,907,556-2,913,459 | - | C2H11g07786 | CX11g011467 | LOC_Os11g07050 | Os11g0171700 | - | Detail |
| C1H11g24257 | 11:2,923,769-2,928,219 | + | C2H11g16481 | CX11g012659 | LOC_Os11g07060 | Os11g0171800 | - | Detail |
| C1H11g07858 | 11:2,933,594-2,935,192 | + | C2H11g17291 | CX11g014246 | LOC_Os11g07090 | Os11g0172100 | - | Detail |
| C1H11g11538 | 11:2,938,383-2,943,608 | + | C2H11g10714 | CX11g012659 | LOC_Os11g07124 | Os11g0172400 | - | Detail |
| C1H11g02652 | 11:2,951,976-2,955,983 | + | C2H11g18683 | CX11g010943 | LOC_Os11g07225 | Os11g0172400 | - | Detail |
| C1H11g15112 | 11:2,967,116-2,967,790 | + | C2H11g16924 | CX11g012659 | LOC_Os11g07180 | Os11g0173432 | - | Detail |
| C1H11g29660 | 11:2,972,042-2,974,877 | + | C2H11g09381 | CX11g012659 | LOC_Os11g07240 | Os11g0173750 | - | Detail |
| C1H11g23572 | 11:2,979,521-2,982,681 | + | C2H11g28824 | CX11g012659 | LOC_Os11g07250 | Os11g0173750 | - | Detail |
| C1H11g08716 | 11:2,989,231-2,992,391 | + | C2H11g13925 | CX11g012659 | LOC_Os11g07260 | Os11g0173800 | - | Detail |
| C1H11g14008 | 11:2,995,435-2,998,594 | + | C2H11g09092 | CX11g012659 | LOC_Os11g07270 | Os11g0173900 | - | Detail |
| C1H11g02629 | 11:2,999,091-3,005,017 | - | C2H11g19373 | CX11g011765 | LOC_Os11g07280 | Os11g0174000 | - | Detail |
| C1H11g05401 | 11:3,031,992-3,033,470 | - | C2H11g05977 | CX11g011852 | LOC_Os11g07350 | Os11g0175000 | - | Detail |
| C1H11g09659 | 11:3,041,882-3,043,972 | - | C2H11g05977 | - | LOC_Os11g07330 | Os11g0175000 | - | Detail |
| C1H11g23623 | 11:3,065,480-3,066,932 | - | C2H11g05977 | - | LOC_Os11g07400 | Os11g0175000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003907 | 1:19,187,836-19,188,222 | + | - | - | LOC_Os01g37810 | Os01g0558700 | - | Detail |
| CX1g000094 | 1:19,189,516-19,192,776 | - | C1H1g26268 | C2H1g02629 | LOC_Os01g37820 | Os01g0558800 | - | Detail |
| CX1g002185 | 1:19,197,851-19,205,679 | + | C1H1g26154 | C2H1g25024 | LOC_Os01g37825 | Os01g0558900 | - | Detail |
| CX1g005822 | 1:19,207,158-19,211,366 | + | C1H1g23221 | C2H1g22293 | LOC_Os01g37832 | Os01g0559000 | - | Detail |
| CX1g000202 | 1:19,215,476-19,219,202 | + | C1H1g29674 | C2H1g19302 | LOC_Os01g37837 | Os01g0559100 | - | Detail |
| CX1g007154 | 1:19,221,512-19,224,140 | + | C1H1g09716 | C2H1g01229 | LOC_Os01g37842 | Os01g0559200 | - | Detail |
| CX1g002323 | 1:19,225,987-19,227,579 | - | - | - | - | Os01g0595300 | - | Detail |
| CX1g002304 | 1:19,230,261-19,232,633 | + | C1H1g22599 | C2H1g20640 | LOC_Os01g37850 | Os01g0559300 | - | Detail |
| CX1g002284 | 1:19,235,780-19,241,038 | + | C1H1g25483 | C2H1g12740 | LOC_Os01g37870 | Os01g0559500 | WSL | Detail |
| CX1g000932 | 1:19,246,801-19,247,067 | - | - | - | - | - | - | Detail |
| CX1g000402 | 1:19,247,952-19,248,104 | + | - | - | - | Os01g0728000 | - | Detail |
| CX1g006715 | 1:19,256,367-19,256,552 | - | - | - | - | - | - | Detail |
| CX1g001668 | 1:19,257,105-19,261,363 | + | C1H1g09753 | C2H1g20416 | LOC_Os01g37910 | Os01g0559600 | - | Detail |
| CX1g000727 | 1:19,268,274-19,268,570 | + | - | - | - | Os01g0559750 | - | Detail |
| CX1g005981 | 1:19,273,262-19,273,447 | - | - | - | - | - | - | Detail |
| CX1g004785 | 1:19,273,938-19,274,130 | - | - | - | - | - | - | Detail |
| CX1g000591 | 1:19,278,670-19,283,748 | - | C1H1g31264 | C2H1g03829 | LOC_Os01g37960 | Os01g0560000 | - | Detail |
| CX1g005030 | 1:19,288,635-19,291,494 | + | C1H1g27095 | C2H1g09836 | LOC_Os01g37980 | Os01g0560200 | - | Detail |
| CX1g003428 | 1:19,325,084-19,326,634 | - | C1H1g22663 | C2H1g16684 | LOC_Os01g38110 | Os01g0561600 | - | Detail |
| CX1g002676 | 1:19,358,670-19,361,560 | - | C1H1g26653 | C2H1g25581 | LOC_Os01g38480 | Os01g0565600 | - | Detail |