| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g01972 | 1:34,078,485-34,082,419 | + | C2H1g18513 | CX1g005515 | LOC_Os01g66240 | Os01g0885600 | - | Detail |
| C1H1g29332 | 1:34,083,425-34,085,917 | + | C2H1g01164 | CX1g000226 | LOC_Os01g66250 | Os01g0885700 | SDRLK-17 | Detail |
| C1H1g27742 | 1:34,091,952-34,092,515 | + | C2H1g00754 | CX1g003973 | LOC_Os01g66270 | Os01g0885900 | - | Detail |
| C1H1g03785 | 1:34,094,128-34,096,700 | - | C2H1g29714 | CX1g003328 | LOC_Os01g66280 | Os01g0886000 | - | Detail |
| C1H1g16950 | 1:34,105,328-34,108,176 | + | C2H1g10247 | CX1g007029 | LOC_Os01g66290 | Os01g0886200 | - | Detail |
| C1H1g22195 | 1:34,112,951-34,117,445 | + | C2H1g02946 | CX1g005699 | LOC_Os01g66300 | Os01g0886300 | - | Detail |
| C1H1g24324 | 1:34,121,489-34,121,758 | - | C2H1g26611 | CX1g003847 | LOC_Os01g66320 | Os01g0886500 | - | Detail |
| C1H1g06569 | 1:34,122,699-34,128,255 | - | C2H1g25926 | CX1g001643 | LOC_Os01g66330 | Os01g0886600 | - | Detail |
| C1H1g09303 | 1:34,136,301-34,141,485 | + | C2H1g16527 | CX1g002780 | LOC_Os01g66350 | Os01g0886900 | - | Detail |
| C1H1g04514 | 1:34,142,745-34,145,648 | + | C2H1g22994 | CX1g001757 | LOC_Os01g66360 | Os01g0887100 | - | Detail |
| C1H1g16536 | 1:34,146,219-34,150,862 | - | C2H1g01577 | CX1g005333 | LOC_Os01g66379 | Os01g0887400 | - | Detail |
| C1H1g11314 | 1:34,159,913-34,164,948 | - | C2H1g28074 | CX1g004709 | LOC_Os01g66420 | Os01g0887700 | - | Detail |
| C1H1g19688 | 1:34,168,105-34,170,812 | + | C2H1g23351 | CX1g007087 | LOC_Os01g66440 | - | - | Detail |
| C1H1g03558 | 1:34,171,813-34,172,076 | - | - | CX1g000045 | - | Os01g0888022 | - | Detail |
| C1H1g13104 | 1:34,188,525-34,188,782 | + | C2H1g28944 | CX1g001905 | LOC_Os01g66490 | Os01g0888300 | - | Detail |
| C1H1g02935 | 1:34,188,866-34,190,389 | + | C2H1g28944 | CX1g001905 | LOC_Os01g66490 | Os01g0888300 | - | Detail |
| C1H1g03540 | 1:34,195,641-34,201,813 | - | C2H1g16784 | CX1g002416 | LOC_Os01g66500 | Os01g0888500 | - | Detail |
| C1H1g07656 | 1:34,204,992-34,208,563 | + | C2H1g08009 | CX1g004975 | LOC_Os01g66510 | Os01g0888600 | - | Detail |
| C1H1g05592 | 1:34,208,884-34,212,588 | - | C2H1g13613 | CX1g003196 | LOC_Os01g66520 | Os01g0888700 | - | Detail |
| C1H1g23555 | 1:34,215,273-34,215,713 | + | - | CX1g002579 | LOC_Os01g66530 | Os01g0888800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g036392 | 4:8,415,807-8,423,134 | + | C1H4g06530 | C2H4g16796 | LOC_Os04g17050 | Os04g0244400 | - | Detail |
| CX4g033261 | 4:8,424,031-8,432,915 | + | C1H4g03282 | C2H4g15471 | LOC_Os04g17064 | Os04g0244500 | - | Detail |
| CX4g033837 | 4:8,439,100-8,439,853 | - | C1H4g00844 | C2H4g22629 | LOC_Os04g17100 | Os04g0244800 | - | Detail |
| CX4g033919 | 4:8,494,937-8,495,428 | - | - | - | - | - | - | Detail |
| CX4g036278 | 4:8,527,120-8,527,350 | - | - | - | - | - | - | Detail |
| CX4g033663 | 4:8,597,498-8,597,863 | + | - | - | LOC_Os04g17640 | - | - | Detail |
| CX4g035132 | 4:8,633,425-8,634,138 | - | - | - | - | - | - | Detail |
| CX4g033363 | 4:8,637,219-8,643,496 | - | C1H4g07475 | C2H4g17703 | LOC_Os04g17650 | Os04g0249500 | OsSUS7 | Detail |
| CX4g032666 | 4:8,655,239-8,658,498 | - | C1H4g12276 | C2H4g28644 | LOC_Os04g17660 | Os04g0249600 | STR6, OsHAC1;2, OsStr6, OsRhST, RLD | Detail |
| CX4g036092 | 4:8,661,785-8,662,072 | - | - | - | - | - | - | Detail |
| CX4g031627 | 4:8,690,124-8,690,327 | - | - | - | - | - | - | Detail |
| CX4g035235 | 4:8,741,171-8,741,442 | + | - | - | - | - | - | Detail |
| CX4g036578 | 4:8,743,401-8,749,959 | + | C1H4g19970 | C2H4g18602 | LOC_Os04g17700 | Os04g0250700 | - | Detail |
| CX4g032006 | 4:8,758,629-8,758,811 | - | - | - | - | - | - | Detail |
| CX4g035388 | 4:8,762,443-8,763,259 | - | C1H4g10578 | C2H4g09941 | - | Os04g0251825 | - | Detail |
| CX4g032583 | 4:8,764,375-8,764,831 | - | - | - | - | - | - | Detail |
| CX4g035352 | 4:8,770,127-8,770,708 | + | - | - | - | - | - | Detail |
| CX4g036369 | 4:8,912,278-8,930,564 | - | C1H4g05815 | C2H4g01240 | LOC_Os04g18010 | Os04g0252200 | - | Detail |
| CX4g034469 | 4:8,944,594-8,959,933 | - | C1H4g20695 | C2H4g12300 | LOC_Os04g18030 | Os04g0252400 | - | Detail |
| CX4g035702 | 4:8,963,750-8,964,097 | + | - | - | - | Os01g0894075 | - | Detail |