| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g24767 | 1:31,286,368-31,288,410 | - | C2H1g26804 | CX1g004254 | LOC_Os01g60860 | Os01g0823900 | OsPUB3 | Detail |
| C1H1g23645 | 1:31,311,540-31,312,747 | + | C2H1g17727 | CX1g003469 | LOC_Os01g60900 | Os01g0824500 | OsEPFL9 | Detail |
| C1H1g13975 | 1:31,314,041-31,316,857 | + | C2H1g23198 | - | - | - | - | Detail |
| C1H1g18869 | 1:31,316,975-31,321,221 | + | C2H1g04173 | CX1g002737 | LOC_Os01g60910 | Os01g0824600 | - | Detail |
| C1H1g11676 | 1:31,325,052-31,326,511 | + | C2H1g16723 | CX1g003180 | LOC_Os01g60920 | Os01g0824700 | - | Detail |
| C1H1g20864 | 1:31,329,181-31,331,565 | + | C2H1g02718 | CX1g006995 | LOC_Os01g60930 | Os01g0824800 | - | Detail |
| C1H1g01275 | 1:31,333,008-31,333,688 | + | C2H1g05149 | CX1g005075 | LOC_Os01g60940 | Os01g0824900 | - | Detail |
| C1H1g30844 | 1:31,338,832-31,339,973 | + | C2H1g11166 | CX1g007134 | LOC_Os01g60960 | Os01g0825000 | LBD1-8 | Detail |
| C1H1g30975 | 1:31,357,035-31,359,303 | - | C2H1g11491 | CX1g003391 | LOC_Os01g61010 | Os01g0825500 | - | Detail |
| C1H1g04795 | 1:31,368,102-31,372,421 | - | C2H1g13725 | CX1g004445 | LOC_Os01g61030 | Os01g0825700 | - | Detail |
| C1H1g30003 | 1:31,374,374-31,380,144 | - | C2H1g15106 | CX1g002793 | LOC_Os01g61044 | Os01g0825800 | - | Detail |
| C1H1g26464 | 1:31,382,208-31,383,731 | + | C2H1g08505 | CX1g003706 | LOC_Os01g61060 | Os01g0825900 | - | Detail |
| C1H1g18090 | 1:31,384,234-31,384,675 | + | C2H1g08505 | CX1g003706 | LOC_Os01g61070 | Os01g0826000 | OsATX | Detail |
| C1H1g02547 | 1:31,402,255-31,404,413 | + | C2H1g27828 | CX1g004814 | LOC_Os01g61080 | Os01g0826400 | OsWRKY24 | Detail |
| C1H1g25773 | 1:31,408,290-31,408,805 | - | C2H1g30286 | CX1g003105 | LOC_Os05g39710 | Os01g0826800 | - | Detail |
| C1H1g20253 | 1:31,416,064-31,421,141 | - | C2H1g22369 | CX1g004110 | LOC_Os01g61120 | Os01g0826900 | - | Detail |
| C1H1g11730 | 1:31,422,389-31,426,099 | - | C2H1g22962 | CX1g005102 | LOC_Os01g61150 | Os01g0827200 | - | Detail |
| C1H1g13234 | 1:31,428,490-31,431,015 | + | C2H1g11237 | CX1g005055 | LOC_Os01g61160 | Os01g0827300 | OsChI1 | Detail |
| C1H1g28329 | 1:31,432,857-31,433,525 | - | C2H1g22870 | CX1g000110 | LOC_Os01g61170 | Os01g0827400 | - | Detail |
| C1H1g29263 | 1:31,434,440-31,438,149 | + | C2H1g27943 | CX1g001550 | LOC_Os01g61180 | Os01g0827500 | OsExo70B1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g036392 | 4:8,415,807-8,423,134 | + | C1H4g06530 | C2H4g16796 | LOC_Os04g17050 | Os04g0244400 | - | Detail |
| CX4g033261 | 4:8,424,031-8,432,915 | + | C1H4g03282 | C2H4g15471 | LOC_Os04g17064 | Os04g0244500 | - | Detail |
| CX4g033837 | 4:8,439,100-8,439,853 | - | C1H4g00844 | C2H4g22629 | LOC_Os04g17100 | Os04g0244800 | - | Detail |
| CX4g033919 | 4:8,494,937-8,495,428 | - | - | - | - | - | - | Detail |
| CX4g036278 | 4:8,527,120-8,527,350 | - | - | - | - | - | - | Detail |
| CX4g033663 | 4:8,597,498-8,597,863 | + | - | - | LOC_Os04g17640 | - | - | Detail |
| CX4g035132 | 4:8,633,425-8,634,138 | - | - | - | - | - | - | Detail |
| CX4g033363 | 4:8,637,219-8,643,496 | - | C1H4g07475 | C2H4g17703 | LOC_Os04g17650 | Os04g0249500 | OsSUS7 | Detail |
| CX4g032666 | 4:8,655,239-8,658,498 | - | C1H4g12276 | C2H4g28644 | LOC_Os04g17660 | Os04g0249600 | STR6, OsHAC1;2, OsStr6, OsRhST, RLD | Detail |
| CX4g036092 | 4:8,661,785-8,662,072 | - | - | - | - | - | - | Detail |
| CX4g031627 | 4:8,690,124-8,690,327 | - | - | - | - | - | - | Detail |
| CX4g035235 | 4:8,741,171-8,741,442 | + | - | - | - | - | - | Detail |
| CX4g036578 | 4:8,743,401-8,749,959 | + | C1H4g19970 | C2H4g18602 | LOC_Os04g17700 | Os04g0250700 | - | Detail |
| CX4g032006 | 4:8,758,629-8,758,811 | - | - | - | - | - | - | Detail |
| CX4g035388 | 4:8,762,443-8,763,259 | - | C1H4g10578 | C2H4g09941 | - | Os04g0251825 | - | Detail |
| CX4g032583 | 4:8,764,375-8,764,831 | - | - | - | - | - | - | Detail |
| CX4g035352 | 4:8,770,127-8,770,708 | + | - | - | - | - | - | Detail |
| CX4g036369 | 4:8,912,278-8,930,564 | - | C1H4g05815 | C2H4g01240 | LOC_Os04g18010 | Os04g0252200 | - | Detail |
| CX4g034469 | 4:8,944,594-8,959,933 | - | C1H4g20695 | C2H4g12300 | LOC_Os04g18030 | Os04g0252400 | - | Detail |
| CX4g035702 | 4:8,963,750-8,964,097 | + | - | - | - | Os01g0894075 | - | Detail |