| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g02435 | 4:26,718,889-26,720,819 | + | C1H4g11906 | CX4g031886 | LOC_Os04g52361 | Os04g0613500 | - | Detail |
| C2H4g14262 | 4:26,724,353-26,728,915 | - | C1H4g03528 | CX4g033920 | LOC_Os04g52370 | Os04g0613700 | UAP2 | Detail |
| C2H4g30596 | 4:26,734,579-26,740,509 | - | C1H4g12683 | CX4g033615 | LOC_Os04g52380 | Os04g0613800 | - | Detail |
| C2H4g10814 | 4:26,743,828-26,748,949 | - | C1H4g15444 | CX4g032046 | LOC_Os04g52390 | Os04g0613900 | - | Detail |
| C2H4g02940 | 4:26,754,868-26,757,310 | + | C1H4g09621 | CX4g033364 | LOC_Os04g52400 | Os04g0614000 | - | Detail |
| C2H4g14823 | 4:26,758,946-26,760,350 | + | C1H4g18002 | CX4g033138 | LOC_Os04g52410 | Os04g0614100 | - | Detail |
| C2H4g28997 | 4:26,763,313-26,766,976 | + | C1H4g00068 | CX4g031526 | LOC_Os04g52420 | Os04g0616900 | - | Detail |
| C2H4g06699 | 4:26,770,988-26,772,512 | + | C1H4g05036 | - | - | Os04g0614300 | - | Detail |
| C2H4g17218 | 4:26,775,472-26,781,526 | + | C1H4g02712 | CX4g035904 | LOC_Os04g52450 | Os04g0614600 | - | Detail |
| C2H4g10708 | 4:26,790,164-26,799,292 | + | C1H4g17515 | CX4g035957 | LOC_Os04g52460 | Os04g0614700 | - | Detail |
| C2H4g23243 | 4:26,811,933-26,816,868 | + | C1H4g20369 | CX4g036351 | LOC_Os04g52479 | Os04g0615000 | NAL1, nal1, cul1, GPS, SPIKE, SPIKE/LSCHL4/NAL1/GPS, SPIKE/NAL1, LSCHL4 | Detail |
| C2H4g24013 | 4:26,817,995-26,822,447 | + | C1H4g29702 | CX4g034949 | LOC_Os04g52500 | Os04g0615100 | - | Detail |
| C2H4g04550 | 4:26,823,039-26,823,723 | - | C1H4g06180 | - | LOC_Os04g52504 | Os04g0615200 | - | Detail |
| C2H4g11553 | 4:26,826,153-26,829,725 | + | C1H4g16195 | CX4g031653 | LOC_Os04g52520 | Os04g0615500 | - | Detail |
| C2H4g12331 | 4:26,830,483-26,831,606 | + | C1H4g22078 | CX4g031949 | LOC_Os04g52530 | Os04g0615600 | - | Detail |
| C2H4g15420 | 4:26,843,505-26,848,072 | + | C1H4g15848 | CX4g034962 | LOC_Os04g52540 | Os04g0615700 | OsAGO2 | Detail |
| C2H4g00576 | 4:26,849,148-26,854,139 | + | C1H4g23171 | CX4g031812 | LOC_Os04g52550 | Os04g0615800 | - | Detail |
| C2H4g30305 | 4:26,854,437-26,858,817 | - | C1H4g27864 | CX4g035991 | LOC_Os04g52560 | Os04g0615900 | - | Detail |
| C2H4g12428 | 4:26,857,632-26,858,214 | + | - | - | - | - | - | Detail |
| C2H4g21361 | 4:26,858,288-26,858,792 | + | - | - | - | Os04g0615850 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g034604 | 4:7,577,532-7,577,783 | + | - | - | - | - | - | Detail |
| CX4g034680 | 4:7,629,207-7,629,563 | - | - | - | - | - | - | Detail |
| CX4g032785 | 4:7,643,160-7,648,049 | + | C1H4g22740 | C2H4g25571 | LOC_Os04g14990 | Os04g0225700 | - | Detail |
| CX4g032287 | 4:7,660,289-7,662,506 | + | C1H4g21527 | C2H4g26908 | - | Os04g0533200 | Os2R_MYB48 | Detail |
| CX4g035687 | 4:7,670,783-7,671,085 | - | - | - | - | - | - | Detail |
| CX4g034761 | 4:7,672,228-7,674,870 | + | - | C2H11g25564 | - | - | - | Detail |
| CX4g033833 | 4:7,727,857-7,728,033 | + | - | - | - | Os09g0341901 | - | Detail |
| CX4g035071 | 4:7,769,890-7,772,648 | + | C1H4g29899 | C2H4g02986 | LOC_Os04g15560 | Os04g0226340 | - | Detail |
| CX4g032558 | 4:7,772,318-7,772,527 | - | - | - | - | - | - | Detail |
| CX4g033548 | 4:7,774,365-7,774,628 | - | - | - | - | - | - | Detail |
| CX4g032124 | 4:7,795,733-7,798,814 | + | C1H4g17421 | C2H4g23707 | LOC_Os04g15580 | Os04g0226600 | SDK5 | Detail |
| CX4g035840 | 4:7,848,576-7,851,662 | + | C1H4g17421 | C2H4g23707 | LOC_Os04g15580 | Os04g0226600 | SDK5 | Detail |
| CX4g031366 | 4:7,880,394-7,884,403 | + | C1H4g13475 | C2H4g24973 | LOC_Os04g15630 | Os04g0226800 | - | Detail |
| CX4g036483 | 4:7,899,537-7,899,873 | - | C1H4g00401 | C2H4g17108 | - | - | - | Detail |
| CX4g031429 | 4:7,900,286-7,905,072 | + | C1H4g23086 | C2H4g21260 | LOC_Os04g15650 | Os04g0227000 | - | Detail |
| CX4g032952 | 4:7,926,154-7,929,282 | + | C1H4g29899 | C2H4g19700 | LOC_Os04g15660 | Os04g0227200 | - | Detail |
| CX4g034005 | 4:7,930,394-7,930,753 | + | - | - | - | - | - | Detail |
| CX4g032868 | 4:7,931,422-7,931,688 | + | - | - | LOC_Os05g35980 | Os12g0444500 | - | Detail |
| CX4g034260 | 4:7,934,895-7,935,803 | + | C1H4g05741 | C2H4g20815 | LOC_Os04g15670 | - | - | Detail |
| CX4g031813 | 4:7,952,953-7,957,411 | + | C1H4g21393 | C2H4g23720 | LOC_Os04g15690 | Os04g0227500 | - | Detail |