| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g03165 | 12:1,360,288-1,360,858 | - | C2H12g12992 | CX12g018471 | LOC_Os12g03540 | Os12g0129400 | - | Detail |
| C1H12g14356 | 12:1,375,895-1,376,203 | + | C2H12g26837 | - | - | - | - | Detail |
| C1H12g18819 | 12:1,376,295-1,376,501 | + | C2H12g25798 | - | - | - | - | Detail |
| C1H12g26172 | 12:1,376,636-1,376,971 | + | C2H12g21094 | CX12g016696 | LOC_Os12g06930 | - | - | Detail |
| C1H12g09635 | 12:1,397,115-1,402,343 | - | C2H12g15851 | CX12g017965 | LOC_Os12g03720 | Os12g0131150 | - | Detail |
| C1H12g19116 | 12:1,405,307-1,408,132 | + | C2H12g29504 | CX12g017842 | LOC_Os12g03730 | Os12g0131200 | - | Detail |
| C1H12g05970 | 12:1,408,673-1,409,306 | - | C2H12g21923 | CX12g016235 | LOC_Os11g03920 | Os12g0131266 | - | Detail |
| C1H12g16146 | 12:1,409,316-1,409,582 | - | C2H12g30346 | - | - | - | - | Detail |
| C1H12g22049 | 12:1,410,865-1,415,552 | - | C2H12g04882 | CX12g015993 | LOC_Os12g03790 | Os12g0131900 | - | Detail |
| C1H12g27375 | 12:1,426,768-1,431,870 | + | C2H12g26793 | CX12g015231 | LOC_Os12g03810 | Os12g0132200 | - | Detail |
| C1H12g17838 | 12:1,428,448-1,432,862 | - | C2H12g09084 | CX12g016449 | LOC_Os12g03816 | Os12g0132300 | OsCML3 | Detail |
| C1H12g18740 | 12:1,433,948-1,437,904 | - | C2H12g06878 | CX12g016015 | LOC_Os12g03822 | Os12g0132400 | OsRIP1 | Detail |
| C1H12g16357 | 12:1,438,837-1,439,218 | - | C2H12g15683 | CX12g015235 | - | - | - | Detail |
| C1H12g00495 | 12:1,442,784-1,448,368 | - | C2H12g06293 | CX12g016345 | LOC_Os11g04010 | Os12g0500800 | - | Detail |
| C1H12g09294 | 12:1,450,440-1,454,857 | - | C2H12g25753 | - | LOC_Os12g03830 | Os12g0132500 | - | Detail |
| C1H12g05342 | 12:1,459,029-1,463,614 | - | C2H12g10240 | - | LOC_Os12g03860 | Os12g0132800 | - | Detail |
| C1H12g05091 | 12:1,469,365-1,470,729 | + | C2H12g14231 | - | - | Os12g0132900 | - | Detail |
| C1H12g13868 | 12:1,470,627-1,476,361 | - | C2H12g02432 | - | LOC_Os12g03870 | Os12g0133000 | - | Detail |
| C1H12g01014 | 12:1,477,537-1,479,737 | - | C2H12g01792 | CX11g013375 | LOC_Os12g03880 | Os12g0133050 | OsP0C | Detail |
| C1H12g17796 | 12:1,487,917-1,495,408 | - | C2H12g17288 | - | LOC_Os12g03899 | Os12g0133100 | OsVMT, OsZIFL12, OsVMT/OsZIFL12 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g032433 | 4:6,661,190-6,662,942 | - | C1H4g07664 | C2H4g01739 | LOC_Os04g13160 | Os04g0208500 | - | Detail |
| CX4g035372 | 4:6,665,727-6,667,537 | - | C1H4g06544 | C2H4g10339 | LOC_Os04g13170 | Os04g0208600 | - | Detail |
| CX4g031728 | 4:6,689,969-6,690,313 | + | C1H4g04010 | - | LOC_Os04g13190 | Os04g0208900 | - | Detail |
| CX4g033845 | 4:6,703,176-6,714,445 | - | C1H4g10533 | C2H4g00571 | LOC_Os04g13210 | Os04g0209200 | OsABCC9 | Detail |
| CX4g033865 | 4:6,722,822-6,730,942 | - | C1H4g24328 | C2H4g15555 | LOC_Os04g13220 | Os04g0209300 | - | Detail |
| CX4g032965 | 4:6,738,084-6,738,251 | - | - | - | LOC_Os05g42448 | - | - | Detail |
| CX4g035176 | 4:6,777,597-6,778,333 | + | C1H4g07264 | - | - | - | - | Detail |
| CX4g033836 | 4:6,817,178-6,820,232 | + | C1H4g15372 | C2H4g06684 | LOC_Os04g13364 | Os04g0210700 | - | Detail |
| CX4g032533 | 4:6,836,956-6,838,426 | - | C1H4g09398 | - | - | Os04g0211700 | - | Detail |
| CX4g032753 | 4:6,839,507-6,839,794 | + | - | - | - | - | - | Detail |
| CX4g034363 | 4:6,848,273-6,849,505 | - | C1H4g21611 | C2H4g07997 | LOC_Os04g13460 | Os04g0211900 | - | Detail |
| CX4g035091 | 4:6,856,648-6,856,869 | + | - | - | - | - | - | Detail |
| CX4g033200 | 4:6,859,614-6,872,362 | + | C1H4g12804 | C2H4g28740 | LOC_Os04g13470 | Os04g0212200 | - | Detail |
| CX4g036158 | 4:6,874,766-6,874,987 | + | - | - | - | - | - | Detail |
| CX4g033217 | 4:6,877,034-6,877,572 | + | C1H4g25525 | C2H4g27029 | LOC_Os04g13480 | Os04g0212450 | - | Detail |
| CX4g031980 | 4:6,923,167-6,924,772 | + | C1H4g04473 | C2H4g27586 | LOC_Os04g13530 | Os04g0212700 | - | Detail |
| CX4g036131 | 4:6,931,131-6,932,018 | - | C1H4g19407 | - | LOC_Os04g13540 | Os04g0213100 | OsHFP | Detail |
| CX4g035833 | 4:6,979,360-6,981,885 | + | C1H4g27274 | C2H4g09067 | LOC_Os04g13590 | Os04g0152400 | - | Detail |
| CX4g036574 | 4:6,982,929-6,983,967 | - | C1H4g25587 | C2H4g16880 | LOC_Os04g13640 | Os04g0213800 | - | Detail |
| CX4g035678 | 4:7,084,428-7,084,850 | + | - | - | - | - | - | Detail |