| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g21127 | 4:22,920,359-22,922,438 | - | C1H4g17930 | CX4g031701 | LOC_Os04g44830 | Os04g0530600 | - | Detail |
| C2H4g29146 | 4:22,923,065-22,926,735 | - | C1H4g14381 | CX4g032283 | LOC_Os04g44840 | Os04g0530700 | - | Detail |
| C2H4g07429 | 4:22,931,080-22,932,105 | + | C1H4g21940 | - | LOC_Os04g44850 | Os04g0530900 | - | Detail |
| C2H4g04476 | 4:22,934,589-22,935,339 | - | - | - | - | - | - | Detail |
| C2H4g11448 | 4:22,936,569-22,937,151 | + | C1H4g00210 | CX4g035036 | LOC_Os04g44870 | Os04g0531100 | OsERG3, RPP16 | Detail |
| C2H4g06600 | 4:22,947,447-22,948,854 | + | C1H4g00210 | CX4g035036 | LOC_Os04g44870 | Os04g0531100 | OsERG3, RPP16 | Detail |
| C2H4g02511 | 4:22,949,999-22,950,298 | - | - | CX4g031644 | LOC_Os04g44880 | Os04g0531200 | - | Detail |
| C2H4g12834 | 4:22,952,434-22,957,039 | + | C1H4g10707 | CX4g035695 | LOC_Os04g44890 | Os04g0531300 | - | Detail |
| C2H4g25391 | 4:22,958,408-22,962,786 | - | C1H4g31207 | CX4g036523 | LOC_Os04g44900 | Os04g0531400 | - | Detail |
| C2H4g22643 | 4:22,964,903-22,966,942 | + | C1H4g31207 | CX4g033866 | LOC_Os04g44910 | Os04g0531500 | - | Detail |
| C2H4g22323 | 4:22,968,378-22,973,384 | + | C1H4g07887 | CX4g033866 | LOC_Os04g44920 | Os04g0531700 | - | Detail |
| C2H4g10841 | 4:22,981,665-22,983,063 | - | C1H4g07887 | CX4g032989 | LOC_Os04g44950 | Os04g0531900 | - | Detail |
| C2H4g11471 | 4:22,987,498-22,989,527 | - | C1H4g29288 | CX4g035062 | LOC_Os04g44980 | Os04g0532100 | - | Detail |
| C2H4g28812 | 4:22,993,577-22,994,979 | + | C1H4g29914 | CX4g036373 | LOC_Os04g45000 | Os04g0532400 | - | Detail |
| C2H4g21448 | 4:22,997,312-22,998,533 | - | C1H4g23933 | CX4g034071 | LOC_Os04g45010 | Os04g0532500 | - | Detail |
| C2H4g29998 | 4:23,017,810-23,020,197 | + | C1H4g31469 | CX4g033056 | LOC_Os04g45020 | Os04g0532800 | Os2R_MYB47 | Detail |
| C2H4g02808 | 4:23,026,614-23,033,043 | + | C1H4g04742 | CX4g036390 | LOC_Os04g45040 | Os04g0533000 | - | Detail |
| C2H4g29228 | 4:23,039,083-23,040,492 | + | C1H4g24649 | CX4g033299 | LOC_Os04g45060 | Os04g0533200 | Os2R_MYB48 | Detail |
| C2H4g10200 | 4:23,044,385-23,048,090 | - | C1H4g12380 | CX4g032901 | LOC_Os04g45070 | Os04g0533300 | - | Detail |
| C2H4g06912 | 4:23,055,812-23,057,704 | - | C1H4g03742 | CX4g031506 | LOC_Os04g45090 | Os04g0533500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g033852 | 4:6,342,341-6,350,432 | - | C1H4g17374 | C2H4g25768 | LOC_Os04g12530 | Os04g0201500 | OsAAT30 | Detail |
| CX4g034779 | 4:6,362,705-6,366,221 | - | C1H4g14971 | C2H4g03852 | LOC_Os04g12540 | Os04g0201900 | SDRLK-LecRK1, OsLecRK1, Bph3 | Detail |
| CX4g034921 | 4:6,373,273-6,375,708 | - | C1H4g17048 | C2H4g12193 | LOC_Os04g12560 | Os04g0202300 | SDRLK-LecRK2, OsLecRK2, Bph3 | Detail |
| CX4g032586 | 4:6,383,146-6,385,578 | - | C1H4g14846 | C2H4g12193 | LOC_Os04g12560 | Os04g0202300 | SDRLK-LecRK2, OsLecRK2, Bph3 | Detail |
| CX4g033006 | 4:6,393,335-6,403,029 | + | C1H4g10301 | C2H4g20823 | LOC_Os08g20500 | Os04g0206200 | - | Detail |
| CX4g032311 | 4:6,404,438-6,409,819 | - | C1H4g18742 | C2H4g18743 | LOC_Os04g12639 | Os04g0203400 | - | Detail |
| CX4g032887 | 4:6,422,701-6,423,827 | + | C1H4g19896 | C2H4g09802 | LOC_Os04g13090 | Os04g0206300 | - | Detail |
| CX4g036460 | 4:6,428,531-6,430,430 | - | C1H4g20976 | C2H4g12841 | LOC_Os04g12950 | Os04g0206450 | - | Detail |
| CX4g031919 | 4:6,432,310-6,434,305 | - | C1H4g28286 | C2H4g21936 | LOC_Os04g12960 | Os04g0206500 | - | Detail |
| CX4g035782 | 4:6,436,876-6,438,878 | - | C1H4g16067 | C2H4g02969 | LOC_Os04g12970 | Os04g0206600 | Os79 | Detail |
| CX4g032182 | 4:6,442,972-6,445,328 | + | C1H4g27745 | C2H4g16076 | LOC_Os04g12980 | Os04g0206700 | - | Detail |
| CX4g032764 | 4:6,446,480-6,447,213 | - | C1H4g18027 | C2H4g16445 | LOC_Os04g12990 | - | - | Detail |
| CX4g031665 | 4:6,450,482-6,450,688 | + | - | - | - | - | - | Detail |
| CX4g036323 | 4:6,452,364-6,453,523 | - | C1H4g10301 | C2H4g16703 | LOC_Os03g31026 | Os04g0206200 | - | Detail |
| CX4g035443 | 4:6,454,613-6,455,107 | - | - | - | - | - | - | Detail |
| CX4g036480 | 4:6,456,301-6,457,428 | + | C1H4g20788 | C2H4g09802 | LOC_Os04g13090 | Os04g0206300 | - | Detail |
| CX4g033024 | 4:6,474,226-6,476,343 | - | C1H4g06112 | C2H4g06798 | LOC_Os04g12960 | Os04g0206500 | - | Detail |
| CX4g036312 | 4:6,478,930-6,480,786 | - | C1H4g18509 | C2H4g21810 | LOC_Os04g12970 | Os04g0206600 | Os79 | Detail |
| CX4g035126 | 4:6,484,787-6,487,055 | + | C1H4g07274 | C2H4g29510 | LOC_Os04g12980 | Os04g0206700 | - | Detail |
| CX4g035007 | 4:6,488,212-6,490,221 | - | C1H4g18027 | C2H4g16445 | LOC_Os04g12990 | Os04g0440300 | - | Detail |