| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g17028 | 9:15,177,907-15,181,149 | - | C2H9g22611 | CX9g055862 | LOC_Os09g30220 | Os09g0479500 | - | Detail |
| C1H9g23057 | 9:15,188,498-15,191,638 | - | C2H9g15107 | CX9g057142 | LOC_Os09g30230 | Os09g0479600 | - | Detail |
| C1H9g19604 | 9:15,196,768-15,198,164 | + | C2H9g19203 | CX9g057685 | LOC_Os09g30240 | Os09g0479800 | - | Detail |
| C1H9g25753 | 9:15,199,540-15,208,253 | + | C2H9g02314 | CX9g057685 | LOC_Os09g30250 | Os09g0479900 | OsSUB58 | Detail |
| C1H9g08275 | 9:15,210,127-15,210,321 | - | - | CX9g057041 | - | Os09g0480100 | - | Detail |
| C1H9g23897 | 9:15,213,370-15,213,867 | + | C2H8g19550 | CX9g056598 | LOC_Os09g30260 | Os08g0496100 | - | Detail |
| C1H9g19838 | 9:15,216,425-15,220,523 | + | C2H9g23194 | CX9g056594 | LOC_Os09g30280 | Os09g0480400 | - | Detail |
| C1H9g16448 | 9:15,221,119-15,221,523 | + | C2H9g17316 | CX9g057550 | LOC_Os09g30290 | Os09g0480532 | - | Detail |
| C1H9g02141 | 9:15,223,454-15,223,741 | + | C2H9g20948 | CX9g056983 | LOC_Os09g30300 | Os09g0480600 | - | Detail |
| C1H9g03249 | 9:15,226,408-15,227,004 | + | C2H9g05733 | CX9g056729 | LOC_Os09g30310 | Os09g0480700 | OsNF-YC7, HAP5E | Detail |
| C1H9g31713 | 9:15,230,043-15,231,588 | + | C2H9g26095 | CX9g056933 | LOC_Os09g30320 | Os09g0480900 | RA8, OsBURP15 | Detail |
| C1H9g10108 | 9:15,237,207-15,242,132 | + | C2H9g23422 | CX9g055379 | LOC_Os09g30330 | Os09g0481100 | OsSec14-23 | Detail |
| C1H9g07055 | 9:15,242,824-15,243,252 | + | - | CX9g055413 | LOC_Os09g30340 | Os09g0481200 | - | Detail |
| C1H9g06557 | 9:15,243,940-15,247,293 | - | C2H9g10417 | CX9g056359 | LOC_Os09g30350 | Os09g0481300 | - | Detail |
| C1H9g00807 | 9:15,248,525-15,249,668 | - | C2H9g01903 | CX9g057816 | LOC_Os09g30360 | Os09g0481400 | - | Detail |
| C1H9g16162 | 9:15,254,733-15,257,726 | + | C2H9g12150 | CX9g058098 | LOC_Os09g30380 | Os09g0481600 | - | Detail |
| C1H9g03818 | 9:15,258,826-15,259,395 | + | - | CX9g055117 | LOC_Os09g30390 | Os09g0481650 | - | Detail |
| C1H9g22023 | 9:15,259,921-15,264,311 | - | C2H9g21307 | CX9g056255 | LOC_Os09g30400 | Os09g0481700 | - | Detail |
| C1H9g16418 | 9:15,272,739-15,273,639 | - | C2H9g06242 | CX9g057443 | LOC_Os09g30410 | Os09g0481800 | - | Detail |
| C1H9g08594 | 9:15,274,691-15,276,923 | - | C2H9g03249 | CX9g055277 | LOC_Os09g30411 | Os09g0482000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g033852 | 4:6,342,341-6,350,432 | - | C1H4g17374 | C2H4g25768 | LOC_Os04g12530 | Os04g0201500 | OsAAT30 | Detail |
| CX4g034779 | 4:6,362,705-6,366,221 | - | C1H4g14971 | C2H4g03852 | LOC_Os04g12540 | Os04g0201900 | SDRLK-LecRK1, OsLecRK1, Bph3 | Detail |
| CX4g034921 | 4:6,373,273-6,375,708 | - | C1H4g17048 | C2H4g12193 | LOC_Os04g12560 | Os04g0202300 | SDRLK-LecRK2, OsLecRK2, Bph3 | Detail |
| CX4g032586 | 4:6,383,146-6,385,578 | - | C1H4g14846 | C2H4g12193 | LOC_Os04g12560 | Os04g0202300 | SDRLK-LecRK2, OsLecRK2, Bph3 | Detail |
| CX4g033006 | 4:6,393,335-6,403,029 | + | C1H4g10301 | C2H4g20823 | LOC_Os08g20500 | Os04g0206200 | - | Detail |
| CX4g032311 | 4:6,404,438-6,409,819 | - | C1H4g18742 | C2H4g18743 | LOC_Os04g12639 | Os04g0203400 | - | Detail |
| CX4g032887 | 4:6,422,701-6,423,827 | + | C1H4g19896 | C2H4g09802 | LOC_Os04g13090 | Os04g0206300 | - | Detail |
| CX4g036460 | 4:6,428,531-6,430,430 | - | C1H4g20976 | C2H4g12841 | LOC_Os04g12950 | Os04g0206450 | - | Detail |
| CX4g031919 | 4:6,432,310-6,434,305 | - | C1H4g28286 | C2H4g21936 | LOC_Os04g12960 | Os04g0206500 | - | Detail |
| CX4g035782 | 4:6,436,876-6,438,878 | - | C1H4g16067 | C2H4g02969 | LOC_Os04g12970 | Os04g0206600 | Os79 | Detail |
| CX4g032182 | 4:6,442,972-6,445,328 | + | C1H4g27745 | C2H4g16076 | LOC_Os04g12980 | Os04g0206700 | - | Detail |
| CX4g032764 | 4:6,446,480-6,447,213 | - | C1H4g18027 | C2H4g16445 | LOC_Os04g12990 | - | - | Detail |
| CX4g031665 | 4:6,450,482-6,450,688 | + | - | - | - | - | - | Detail |
| CX4g036323 | 4:6,452,364-6,453,523 | - | C1H4g10301 | C2H4g16703 | LOC_Os03g31026 | Os04g0206200 | - | Detail |
| CX4g035443 | 4:6,454,613-6,455,107 | - | - | - | - | - | - | Detail |
| CX4g036480 | 4:6,456,301-6,457,428 | + | C1H4g20788 | C2H4g09802 | LOC_Os04g13090 | Os04g0206300 | - | Detail |
| CX4g033024 | 4:6,474,226-6,476,343 | - | C1H4g06112 | C2H4g06798 | LOC_Os04g12960 | Os04g0206500 | - | Detail |
| CX4g036312 | 4:6,478,930-6,480,786 | - | C1H4g18509 | C2H4g21810 | LOC_Os04g12970 | Os04g0206600 | Os79 | Detail |
| CX4g035126 | 4:6,484,787-6,487,055 | + | C1H4g07274 | C2H4g29510 | LOC_Os04g12980 | Os04g0206700 | - | Detail |
| CX4g035007 | 4:6,488,212-6,490,221 | - | C1H4g18027 | C2H4g16445 | LOC_Os04g12990 | Os04g0440300 | - | Detail |