| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g10547 | 9:11,474,854-11,475,303 | - | - | CX9g055979 | LOC_Os09g23370 | Os09g0397700 | - | Detail |
| C1H9g24684 | 9:11,475,605-11,481,114 | + | C2H9g18131 | CX9g057737 | LOC_Os09g23380 | Os09g0397900 | - | Detail |
| C1H9g15364 | 9:11,490,880-11,492,461 | - | C2H9g06160 | - | LOC_Os09g23334 | Os09g0397100 | - | Detail |
| C1H9g09191 | 9:11,496,514-11,497,471 | - | C2H9g10017 | CX9g057334 | - | - | - | Detail |
| C1H9g02879 | 9:11,502,981-11,503,238 | + | - | - | LOC_Os09g23420 | - | - | Detail |
| C1H9g14357 | 9:11,540,086-11,540,355 | + | - | - | - | - | - | Detail |
| C1H9g01744 | 9:11,545,767-11,546,042 | + | - | - | - | - | - | Detail |
| C1H9g04476 | 9:11,552,194-11,553,264 | - | C2H9g26695 | CX9g057630 | - | - | - | Detail |
| C1H9g24092 | 9:11,568,172-11,568,435 | + | - | CX9g054909 | - | Os09g0399502 | - | Detail |
| C1H9g14660 | 9:11,579,968-11,581,315 | - | C2H9g17549 | CX9g057398 | LOC_Os09g23530 | Os09g0399800 | - | Detail |
| C1H9g20560 | 9:11,583,814-11,585,668 | - | C2H9g11831 | CX9g054869 | LOC_Os09g23540 | Os09g0400000 | CAD8B | Detail |
| C1H9g22888 | 9:11,591,549-11,593,575 | + | C2H9g00236 | CX9g056306 | LOC_Os09g23550 | Os09g0400300 | - | Detail |
| C1H9g31530 | 9:11,596,363-11,598,303 | + | C2H9g06042 | CX9g054928 | LOC_Os09g23570 | Os09g0400500 | - | Detail |
| C1H9g28125 | 9:11,604,915-11,605,217 | + | - | CX9g054916 | LOC_Os09g23590 | Os09g0400700 | - | Detail |
| C1H9g11131 | 9:11,605,767-11,606,244 | - | - | - | - | - | - | Detail |
| C1H9g17981 | 9:11,620,236-11,621,253 | + | C2H9g02341 | CX9g058058 | LOC_Os09g23620 | Os09g0401000 | Os2R_MYB82 | Detail |
| C1H9g21372 | 9:11,638,880-11,642,390 | + | C2H9g11860 | CX9g057812 | LOC_Os09g23640 | Os09g0401100 | ABCG21, OsABCG21, STR1 | Detail |
| C1H9g02031 | 9:11,643,122-11,644,138 | - | C2H9g15858 | CX9g055812 | LOC_Os09g23650 | Os09g0401200 | TRXH3, antiSTR1 | Detail |
| C1H9g17030 | 9:11,653,927-11,656,132 | - | C2H9g15858 | CX9g055812 | LOC_Os09g23650 | Os09g0401200 | TRXH3, antiSTR1 | Detail |
| C1H9g22130 | 9:11,656,486-11,660,729 | - | C2H9g19314 | CX9g057187 | LOC_Os09g23650 | Os09g0401300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g033852 | 4:6,342,341-6,350,432 | - | C1H4g17374 | C2H4g25768 | LOC_Os04g12530 | Os04g0201500 | OsAAT30 | Detail |
| CX4g034779 | 4:6,362,705-6,366,221 | - | C1H4g14971 | C2H4g03852 | LOC_Os04g12540 | Os04g0201900 | SDRLK-LecRK1, OsLecRK1, Bph3 | Detail |
| CX4g034921 | 4:6,373,273-6,375,708 | - | C1H4g17048 | C2H4g12193 | LOC_Os04g12560 | Os04g0202300 | SDRLK-LecRK2, OsLecRK2, Bph3 | Detail |
| CX4g032586 | 4:6,383,146-6,385,578 | - | C1H4g14846 | C2H4g12193 | LOC_Os04g12560 | Os04g0202300 | SDRLK-LecRK2, OsLecRK2, Bph3 | Detail |
| CX4g033006 | 4:6,393,335-6,403,029 | + | C1H4g10301 | C2H4g20823 | LOC_Os08g20500 | Os04g0206200 | - | Detail |
| CX4g032311 | 4:6,404,438-6,409,819 | - | C1H4g18742 | C2H4g18743 | LOC_Os04g12639 | Os04g0203400 | - | Detail |
| CX4g032887 | 4:6,422,701-6,423,827 | + | C1H4g19896 | C2H4g09802 | LOC_Os04g13090 | Os04g0206300 | - | Detail |
| CX4g036460 | 4:6,428,531-6,430,430 | - | C1H4g20976 | C2H4g12841 | LOC_Os04g12950 | Os04g0206450 | - | Detail |
| CX4g031919 | 4:6,432,310-6,434,305 | - | C1H4g28286 | C2H4g21936 | LOC_Os04g12960 | Os04g0206500 | - | Detail |
| CX4g035782 | 4:6,436,876-6,438,878 | - | C1H4g16067 | C2H4g02969 | LOC_Os04g12970 | Os04g0206600 | Os79 | Detail |
| CX4g032182 | 4:6,442,972-6,445,328 | + | C1H4g27745 | C2H4g16076 | LOC_Os04g12980 | Os04g0206700 | - | Detail |
| CX4g032764 | 4:6,446,480-6,447,213 | - | C1H4g18027 | C2H4g16445 | LOC_Os04g12990 | - | - | Detail |
| CX4g031665 | 4:6,450,482-6,450,688 | + | - | - | - | - | - | Detail |
| CX4g036323 | 4:6,452,364-6,453,523 | - | C1H4g10301 | C2H4g16703 | LOC_Os03g31026 | Os04g0206200 | - | Detail |
| CX4g035443 | 4:6,454,613-6,455,107 | - | - | - | - | - | - | Detail |
| CX4g036480 | 4:6,456,301-6,457,428 | + | C1H4g20788 | C2H4g09802 | LOC_Os04g13090 | Os04g0206300 | - | Detail |
| CX4g033024 | 4:6,474,226-6,476,343 | - | C1H4g06112 | C2H4g06798 | LOC_Os04g12960 | Os04g0206500 | - | Detail |
| CX4g036312 | 4:6,478,930-6,480,786 | - | C1H4g18509 | C2H4g21810 | LOC_Os04g12970 | Os04g0206600 | Os79 | Detail |
| CX4g035126 | 4:6,484,787-6,487,055 | + | C1H4g07274 | C2H4g29510 | LOC_Os04g12980 | Os04g0206700 | - | Detail |
| CX4g035007 | 4:6,488,212-6,490,221 | - | C1H4g18027 | C2H4g16445 | LOC_Os04g12990 | Os04g0440300 | - | Detail |