| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g26067 | 6:26,475,711-26,480,166 | - | C2H6g26642 | CX6g042212 | LOC_Os06g50340 | Os06g0717200 | FON1 | Detail |
| C1H6g24203 | 6:26,486,546-26,487,767 | + | C2H6g03771 | CX6g044193 | LOC_Os06g50350 | Os06g0717300 | - | Detail |
| C1H6g26535 | 6:26,488,606-26,492,976 | - | C2H6g11097 | CX6g043233 | LOC_Os06g50360 | Os06g0717400 | - | Detail |
| C1H6g11168 | 6:26,500,922-26,504,163 | + | C2H6g06329 | CX6g044654 | LOC_Os06g50370 | Os06g0717600 | - | Detail |
| C1H6g02180 | 6:26,504,718-26,509,063 | - | C2H6g29972 | CX6g042111 | LOC_Os06g50380 | Os06g0717800 | - | Detail |
| C1H6g12787 | 6:26,517,609-26,520,204 | + | C2H6g12324 | CX6g041593 | LOC_Os06g50390 | Os06g0717900 | - | Detail |
| C1H6g01307 | 6:26,519,958-26,520,161 | - | - | - | - | - | - | Detail |
| C1H6g28933 | 6:26,528,690-26,529,557 | + | C2H6g23852 | CX6g045196 | LOC_Os06g50400 | Os06g0718100 | - | Detail |
| C1H6g11029 | 6:26,530,430-26,532,641 | - | C2H6g14031 | CX6g045106 | LOC_Os06g50410 | Os06g0718300 | - | Detail |
| C1H6g25040 | 6:26,536,953-26,537,579 | + | C2H6g24021 | CX6g041719 | LOC_Os06g50420 | Os06g0718400 | - | Detail |
| C1H6g27071 | 6:26,542,159-26,544,289 | + | C2H6g25837 | CX6g043688 | LOC_Os06g50580 | Os06g0719600 | - | Detail |
| C1H6g03080 | 6:26,548,562-26,551,445 | - | C2H6g09082 | CX6g041955 | LOC_Os06g50600 | Os06g0719500 | - | Detail |
| C1H6g00051 | 6:26,555,703-26,563,845 | + | C2H6g19919 | CX6g045246 | LOC_Os06g50850 | Os06g0724200 | - | Detail |
| C1H6g19086 | 6:26,564,128-26,567,302 | - | C2H6g24940 | CX6g044030 | LOC_Os06g50860 | Os06g0724300 | - | Detail |
| C1H6g18113 | 6:26,567,913-26,570,136 | - | C2H6g07069 | CX6g041511 | LOC_Os06g50870 | Os06g0724400 | - | Detail |
| C1H6g27289 | 6:26,570,558-26,573,097 | - | C2H6g29259 | CX6g041595 | LOC_Os06g50880 | Os06g0724500 | - | Detail |
| C1H6g23028 | 6:26,573,237-26,577,225 | + | C2H6g08226 | CX6g043078 | LOC_Os06g50890 | Os06g0724600 | - | Detail |
| C1H6g19535 | 6:26,594,428-26,595,716 | + | C2H6g28694 | CX6g044716 | LOC_Os06g50900 | Os06g0724800 | - | Detail |
| C1H6g31802 | 6:26,598,126-26,610,819 | - | C2H6g09528 | CX6g045960 | LOC_Os06g50910 | Os06g0724700 | - | Detail |
| C1H6g29296 | 6:26,611,960-26,617,519 | + | C2H6g06943 | CX6g044048 | LOC_Os06g50920 | Os06g0724900 | ILA1, ILA1, ila1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g033852 | 4:6,342,341-6,350,432 | - | C1H4g17374 | C2H4g25768 | LOC_Os04g12530 | Os04g0201500 | OsAAT30 | Detail |
| CX4g034779 | 4:6,362,705-6,366,221 | - | C1H4g14971 | C2H4g03852 | LOC_Os04g12540 | Os04g0201900 | SDRLK-LecRK1, OsLecRK1, Bph3 | Detail |
| CX4g034921 | 4:6,373,273-6,375,708 | - | C1H4g17048 | C2H4g12193 | LOC_Os04g12560 | Os04g0202300 | SDRLK-LecRK2, OsLecRK2, Bph3 | Detail |
| CX4g032586 | 4:6,383,146-6,385,578 | - | C1H4g14846 | C2H4g12193 | LOC_Os04g12560 | Os04g0202300 | SDRLK-LecRK2, OsLecRK2, Bph3 | Detail |
| CX4g033006 | 4:6,393,335-6,403,029 | + | C1H4g10301 | C2H4g20823 | LOC_Os08g20500 | Os04g0206200 | - | Detail |
| CX4g032311 | 4:6,404,438-6,409,819 | - | C1H4g18742 | C2H4g18743 | LOC_Os04g12639 | Os04g0203400 | - | Detail |
| CX4g032887 | 4:6,422,701-6,423,827 | + | C1H4g19896 | C2H4g09802 | LOC_Os04g13090 | Os04g0206300 | - | Detail |
| CX4g036460 | 4:6,428,531-6,430,430 | - | C1H4g20976 | C2H4g12841 | LOC_Os04g12950 | Os04g0206450 | - | Detail |
| CX4g031919 | 4:6,432,310-6,434,305 | - | C1H4g28286 | C2H4g21936 | LOC_Os04g12960 | Os04g0206500 | - | Detail |
| CX4g035782 | 4:6,436,876-6,438,878 | - | C1H4g16067 | C2H4g02969 | LOC_Os04g12970 | Os04g0206600 | Os79 | Detail |
| CX4g032182 | 4:6,442,972-6,445,328 | + | C1H4g27745 | C2H4g16076 | LOC_Os04g12980 | Os04g0206700 | - | Detail |
| CX4g032764 | 4:6,446,480-6,447,213 | - | C1H4g18027 | C2H4g16445 | LOC_Os04g12990 | - | - | Detail |
| CX4g031665 | 4:6,450,482-6,450,688 | + | - | - | - | - | - | Detail |
| CX4g036323 | 4:6,452,364-6,453,523 | - | C1H4g10301 | C2H4g16703 | LOC_Os03g31026 | Os04g0206200 | - | Detail |
| CX4g035443 | 4:6,454,613-6,455,107 | - | - | - | - | - | - | Detail |
| CX4g036480 | 4:6,456,301-6,457,428 | + | C1H4g20788 | C2H4g09802 | LOC_Os04g13090 | Os04g0206300 | - | Detail |
| CX4g033024 | 4:6,474,226-6,476,343 | - | C1H4g06112 | C2H4g06798 | LOC_Os04g12960 | Os04g0206500 | - | Detail |
| CX4g036312 | 4:6,478,930-6,480,786 | - | C1H4g18509 | C2H4g21810 | LOC_Os04g12970 | Os04g0206600 | Os79 | Detail |
| CX4g035126 | 4:6,484,787-6,487,055 | + | C1H4g07274 | C2H4g29510 | LOC_Os04g12980 | Os04g0206700 | - | Detail |
| CX4g035007 | 4:6,488,212-6,490,221 | - | C1H4g18027 | C2H4g16445 | LOC_Os04g12990 | Os04g0440300 | - | Detail |