| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g18815 | 2:22,964,531-22,973,156 | - | C1H2g02429 | CX2g019377 | LOC_Os02g40460 | Os02g0617700 | - | Detail |
| C2H2g29974 | 2:22,984,697-22,984,957 | - | - | - | - | - | - | Detail |
| C2H2g26929 | 2:22,988,593-22,990,462 | + | C1H2g22582 | - | LOC_Os02g40490 | - | - | Detail |
| C2H2g04756 | 2:22,994,675-22,996,352 | + | C1H2g02238 | CX2g024840 | LOC_Os02g40500 | Os02g0618100 | OsGRX9, OsGrx_C2.1 | Detail |
| C2H2g05107 | 2:22,997,619-23,000,421 | + | C1H2g04978 | CX2g024264 | LOC_Os02g40510 | Os02g0618200 | OsPRR1, OsTOC1, OsPRR1/OsTOC1 | Detail |
| C2H2g25708 | 2:23,002,033-23,003,523 | - | C1H2g16546 | - | LOC_Os02g40514 | Os02g0618250 | - | Detail |
| C2H2g01262 | 2:23,008,365-23,009,939 | - | C1H2g01139 | CX2g019264 | LOC_Os02g40530 | Os02g0618400 | OsMPS | Detail |
| C2H2g01838 | 2:23,025,294-23,026,795 | + | C1H2g19268 | CX2g024894 | LOC_Os02g40550 | Os02g0618700 | - | Detail |
| C2H2g30582 | 2:23,043,425-23,044,159 | - | - | - | LOC_Os02g40600 | - | - | Detail |
| C2H2g02169 | 2:23,070,406-23,075,582 | - | C1H2g16057 | CX2g023988 | LOC_Os02g40664 | Os02g0619600 | - | Detail |
| C2H2g26987 | 2:23,075,966-23,077,800 | + | C1H2g04094 | - | - | - | - | Detail |
| C2H2g19869 | 2:23,080,364-23,080,630 | - | - | - | - | - | - | Detail |
| C2H2g18142 | 2:23,088,767-23,092,303 | + | C1H2g31349 | CX2g019895 | LOC_Os02g40680 | Os02g0620100 | - | Detail |
| C2H2g10513 | 2:23,093,099-23,093,482 | + | C1H2g31349 | CX2g020219 | LOC_Os02g40690 | Os02g0620200 | - | Detail |
| C2H2g22522 | 2:23,099,083-23,099,503 | + | C1H2g24265 | CX2g023588 | LOC_Os02g40700 | Os02g0620400 | - | Detail |
| C2H2g07540 | 2:23,105,722-23,107,218 | + | C1H2g23096 | CX2g024155 | LOC_Os02g40710 | Os02g0620500 | OsAMT1;3 | Detail |
| C2H2g29061 | 2:23,111,389-23,115,393 | + | C1H2g17359 | CX2g024932 | LOC_Os02g40730 | Os02g0620600 | AMT1;2, OsAMT1;2, AMT1-2, Osamt1-3, "OsAMT1, 3", OsAMT1;3, OsAMT1.3, OsAMT1.2 | Detail |
| C2H2g23641 | 2:23,118,462-23,120,057 | - | C1H2g17305 | CX2g024918 | LOC_Os02g40750 | Os02g0769900 | - | Detail |
| C2H2g07915 | 2:23,128,520-23,133,173 | - | - | - | - | - | - | Detail |
| C2H2g25432 | 2:23,136,851-23,144,033 | + | C1H2g09682 | CX2g022252 | LOC_Os02g40770 | Os02g0621100 | SDG712 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g034135 | 4:4,097,414-4,097,572 | + | - | - | - | Os01g0728000 | - | Detail |
| CX4g036277 | 4:4,113,010-4,114,695 | - | C1H4g26213 | C2H4g19627 | LOC_Os04g08764 | Os04g0169500 | - | Detail |
| CX4g035186 | 4:4,132,991-4,133,465 | - | C1H4g08988 | C2H4g02197 | LOC_Os04g09770 | Os04g0225250 | - | Detail |
| CX4g032473 | 4:4,134,700-4,134,879 | - | - | - | - | - | - | Detail |
| CX4g033744 | 4:4,145,421-4,145,591 | + | - | - | - | - | - | Detail |
| CX4g033092 | 4:4,156,796-4,159,029 | + | C1H4g05807 | C2H4g04047 | LOC_Os04g08824 | Os04g0171600 | - | Detail |
| CX4g035885 | 4:4,162,785-4,164,048 | + | C1H4g24051 | C2H4g15632 | LOC_Os04g08824 | Os04g0171600 | - | Detail |
| CX4g034477 | 4:4,174,915-4,175,151 | + | C1H4g14310 | - | LOC_Os08g20885 | - | - | Detail |
| CX4g033450 | 4:4,196,796-4,201,530 | + | C1H4g06403 | C2H4g27784 | LOC_Os04g08828 | Os04g0174100 | - | Detail |
| CX4g034654 | 4:4,204,954-4,207,205 | + | C1H4g24051 | C2H4g20337 | LOC_Os04g08824 | Os04g0171600 | - | Detail |
| CX4g031382 | 4:4,210,532-4,215,266 | + | C1H4g06403 | C2H4g09503 | LOC_Os04g08828 | Os04g0174100 | - | Detail |
| CX4g031545 | 4:4,225,967-4,227,274 | - | C1H4g20508 | C2H4g13106 | LOC_Os04g09260 | Os04g0172400 | - | Detail |
| CX4g032971 | 4:4,240,931-4,241,608 | - | C1H4g22697 | C2H4g19448 | LOC_Os04g09390 | Os04g0173800 | - | Detail |
| CX4g034531 | 4:4,255,696-4,256,615 | - | C1H4g22795 | C2H4g08316 | - | - | - | Detail |
| CX4g031393 | 4:4,264,315-4,265,234 | - | C1H4g22795 | C2H4g08316 | - | - | - | Detail |
| CX4g034441 | 4:4,282,677-4,285,197 | - | C1H4g23989 | C2H4g22590 | LOC_Os04g08828 | Os04g0171800 | - | Detail |
| CX4g034985 | 4:4,296,279-4,298,527 | + | C1H4g10673 | C2H9g30434 | LOC_Os04g08804 | Os04g0330900 | - | Detail |
| CX4g033229 | 4:4,301,246-4,303,158 | - | C1H4g13047 | C2H4g26043 | LOC_Os04g08828 | Os04g0171800 | - | Detail |
| CX4g035209 | 4:4,306,839-4,308,099 | - | C1H4g12448 | C2H4g09296 | LOC_Os04g09520 | Os04g0462200 | - | Detail |
| CX4g034729 | 4:4,319,918-4,320,079 | + | - | - | LOC_Os11g12240 | - | - | Detail |