| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g30938 | 5:2,805,272-2,811,923 | - | C2H5g11189 | CX5g038368 | LOC_Os05g06300 | Os05g0155000 | - | Detail |
| C1H5g03775 | 5:2,815,276-2,817,834 | + | C2H5g05414 | CX5g040045 | LOC_Os05g06310 | Os05g0155100 | - | Detail |
| C1H5g21843 | 5:2,817,930-2,822,450 | - | C2H5g28338 | CX5g040196 | LOC_Os05g06320 | Os05g0155200 | - | Detail |
| C1H5g06851 | 5:2,830,959-2,834,027 | + | C2H5g03225 | CX5g038322 | LOC_Os05g06330 | Os05g0155300 | - | Detail |
| C1H5g09648 | 5:2,835,244-2,836,748 | - | C2H5g24401 | CX5g036984 | LOC_Os05g06340 | Os05g0155400 | - | Detail |
| C1H5g01429 | 5:2,839,907-2,845,513 | - | C2H5g10870 | CX5g037873 | LOC_Os05g06350 | Os05g0155601 | Imp a1b, Imp3 | Detail |
| C1H5g05444 | 5:2,848,075-2,853,465 | + | C2H5g10571 | CX5g036886 | LOC_Os05g06360 | Os05g0155700 | - | Detail |
| C1H5g20577 | 5:2,868,624-2,871,271 | + | C2H5g22135 | CX5g040720 | LOC_Os05g06420 | Os05g0156200 | - | Detail |
| C1H5g09510 | 5:2,873,426-2,876,817 | - | C2H5g24185 | CX5g039738 | LOC_Os05g06430 | Os05g0156300 | - | Detail |
| C1H5g09608 | 5:2,881,591-2,885,932 | + | C2H5g26310 | CX5g036765 | LOC_Os05g06440 | Os05g0156500 | - | Detail |
| C1H5g14046 | 5:2,886,093-2,891,174 | - | C2H5g19277 | CX5g037146 | LOC_Os05g06450 | Os05g0156600 | - | Detail |
| C1H5g24964 | 5:2,891,860-2,898,352 | - | C2H5g05970 | CX5g038153 | LOC_Os05g06460 | Os05g0156700 | OsLPD1 | Detail |
| C1H5g24978 | 5:2,908,666-2,920,268 | + | C2H5g20269 | CX5g038021 | LOC_Os05g06470 | Os05g0156800 | - | Detail |
| C1H5g24292 | 5:2,920,959-2,925,042 | - | C2H5g09414 | CX5g037368 | LOC_Os05g06480 | Os05g0156900 | Chalk5 | Detail |
| C1H5g00102 | 5:2,930,716-2,933,012 | - | C2H5g11758 | CX5g037609 | LOC_Os05g06500 | Os05g0157200 | - | Detail |
| C1H5g31378 | 5:2,934,635-2,938,649 | - | C2H5g06394 | CX5g036870 | LOC_Os05g06510 | Os05g0157300 | - | Detail |
| C1H5g05132 | 5:2,947,107-2,949,360 | + | C2H5g01907 | CX5g039713 | LOC_Os05g06530 | Os05g0157500 | - | Detail |
| C1H5g16317 | 5:2,954,447-2,961,344 | + | C2H5g01907 | CX5g038380 | LOC_Os05g06540 | Os05g0157600 | - | Detail |
| C1H5g05673 | 5:2,966,260-2,969,935 | + | C2H5g22849 | CX5g039850 | LOC_Os05g06650 | Os05g0158400 | - | Detail |
| C1H5g28371 | 5:2,971,207-2,975,282 | - | C2H5g05727 | CX5g037102 | LOC_Os05g06660 | Os05g0158500 | GS5, OsSCP26 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g035853 | 4:3,852,052-3,852,363 | - | C1H4g12785 | C2H4g19422 | LOC_Os04g08330 | Os04g0165500 | - | Detail |
| CX4g036241 | 4:3,858,264-3,860,384 | + | C1H4g31381 | C2H4g06874 | LOC_Os04g08340 | Os04g0165600 | - | Detail |
| CX4g034083 | 4:3,863,044-3,866,867 | - | C1H4g30280 | C2H4g04495 | LOC_Os04g08350 | Os04g0165700 | - | Detail |
| CX4g034989 | 4:3,886,864-3,889,920 | - | C1H4g18120 | C2H4g24204 | LOC_Os04g08370 | Os04g0165900 | - | Detail |
| CX4g036485 | 4:3,892,132-3,892,314 | - | - | - | LOC_Os01g05330 | - | - | Detail |
| CX4g036344 | 4:3,908,423-3,912,677 | - | C1H4g16596 | C2H4g25306 | LOC_Os04g08410 | Os04g0166400 | - | Detail |
| CX4g032015 | 4:3,915,725-3,915,913 | + | - | - | - | - | - | Detail |
| CX4g034148 | 4:3,920,368-3,920,604 | - | - | - | LOC_Os04g08415 | Os04g0166500 | - | Detail |
| CX4g036063 | 4:3,931,583-3,933,207 | + | C1H4g13488 | C2H4g16904 | LOC_Os04g08450 | Os04g0166600 | OsSFL1 | Detail |
| CX4g035524 | 4:3,939,337-3,939,612 | - | - | - | - | - | - | Detail |
| CX4g033810 | 4:3,949,230-3,951,122 | + | C1H4g11999 | C2H4g26054 | LOC_Os04g08460 | - | - | Detail |
| CX4g033225 | 4:3,990,619-3,993,164 | - | C1H4g21471 | C2H4g21134 | LOC_Os04g08550 | Os04g0167800 | - | Detail |
| CX4g034291 | 4:3,997,091-4,002,609 | - | C1H4g27562 | C2H4g04423 | - | Os04g0167875 | - | Detail |
| CX4g032052 | 4:4,003,829-4,004,465 | - | C1H4g05004 | C2H4g02316 | LOC_Os04g08570 | Os04g0168000 | - | Detail |
| CX4g034069 | 4:4,025,239-4,025,706 | - | C1H4g17104 | - | LOC_Os04g08600 | Os04g0168100 | SRO | Detail |
| CX4g035783 | 4:4,035,258-4,035,464 | + | - | - | - | - | - | Detail |
| CX4g033178 | 4:4,048,304-4,049,509 | - | - | C2H4g06670 | - | Os04g0456200 | - | Detail |
| CX4g032734 | 4:4,063,908-4,064,099 | + | - | - | - | - | - | Detail |
| CX4g036254 | 4:4,086,177-4,086,623 | - | C1H4g08725 | - | LOC_Os04g08730 | - | - | Detail |
| CX4g033888 | 4:4,093,525-4,096,186 | + | C1H4g12046 | C2H4g13508 | LOC_Os04g08740 | Os04g0169100 | ETR2, OsETR2, OS-ETR2, etr2, OsPK1, PK1, ERL1, OsERL1, OsERS3 | Detail |