| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g15163 | 6:10,909,527-10,910,436 | - | C2H6g26915 | CX6g041667 | LOC_Os06g22490 | Os06g0330400 | - | Detail |
| C1H6g09694 | 6:10,954,544-10,956,187 | + | C2H6g04886 | CX6g044761 | LOC_Os06g30500 | Os06g0500700 | - | Detail |
| C1H6g11051 | 6:10,965,151-10,966,143 | + | C2H6g22788 | CX6g044102 | LOC_Os06g30480 | Os06g0500300 | - | Detail |
| C1H6g28721 | 6:10,976,054-10,987,872 | + | C2H6g30055 | CX6g043386 | LOC_Os06g30460 | Os06g0499900 | - | Detail |
| C1H6g12504 | 6:10,992,445-10,995,760 | + | C2H6g17391 | CX6g045782 | LOC_Os06g30440 | Os06g0499500 | - | Detail |
| C1H6g27560 | 6:11,001,556-11,004,371 | + | C2H6g10972 | CX6g041652 | LOC_Os06g30420 | Os06g0499301 | - | Detail |
| C1H6g28317 | 6:11,019,202-11,025,947 | - | C2H6g00827 | CX6g043980 | LOC_Os06g30390 | Os06g0499000 | - | Detail |
| C1H6g05561 | 6:11,028,295-11,031,851 | - | C2H6g00485 | CX6g041677 | LOC_Os06g30380 | Os06g0498900 | - | Detail |
| C1H6g00209 | 6:11,037,216-11,039,505 | + | C2H6g17443 | CX6g043686 | LOC_Os06g30370 | Os06g0498800 | OsMFT1 | Detail |
| C1H6g25364 | 6:11,070,496-11,071,062 | + | C2H6g29118 | CX6g043303 | - | - | - | Detail |
| C1H6g18187 | 6:11,077,474-11,084,340 | - | C2H6g16872 | CX6g043053 | LOC_Os06g30320 | Os06g0498500 | - | Detail |
| C1H6g27568 | 6:11,089,003-11,100,261 | - | C2H6g24539 | CX6g041803 | LOC_Os06g30310 | Os06g0498400 | GWD1 | Detail |
| C1H6g26182 | 6:11,127,801-11,132,082 | - | C2H6g28212 | CX6g043036 | LOC_Os06g30210 | Os06g0497500 | - | Detail |
| C1H6g07599 | 6:11,146,507-11,148,404 | - | C2H6g12814 | CX6g042956 | LOC_Os06g30179 | Os06g0497350 | - | Detail |
| C1H6g09677 | 6:11,181,814-11,184,302 | - | C2H6g12911 | CX6g045078 | LOC_Os06g30130 | Os06g0496800 | - | Detail |
| C1H6g04894 | 6:11,209,923-11,210,907 | - | C2H6g25876 | CX6g041544 | LOC_Os06g30090 | Os06g0496400 | OsbHLH127, OsRSL3 | Detail |
| C1H6g31457 | 6:11,222,490-11,229,832 | - | C2H6g13439 | CX6g043076 | LOC_Os06g30060 | Os06g0496000 | - | Detail |
| C1H6g22414 | 6:11,242,696-11,243,706 | - | C2H6g00870 | CX6g043852 | LOC_Os06g30030 | Os06g0495800 | - | Detail |
| C1H6g11371 | 6:11,248,268-11,255,708 | - | C2H6g25334 | CX6g042382 | LOC_Os06g30020 | Os06g0495700 | - | Detail |
| C1H6g09138 | 6:11,258,987-11,261,280 | - | C2H6g17906 | CX6g045784 | LOC_Os06g29994 | Os06g0495500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g035853 | 4:3,852,052-3,852,363 | - | C1H4g12785 | C2H4g19422 | LOC_Os04g08330 | Os04g0165500 | - | Detail |
| CX4g036241 | 4:3,858,264-3,860,384 | + | C1H4g31381 | C2H4g06874 | LOC_Os04g08340 | Os04g0165600 | - | Detail |
| CX4g034083 | 4:3,863,044-3,866,867 | - | C1H4g30280 | C2H4g04495 | LOC_Os04g08350 | Os04g0165700 | - | Detail |
| CX4g034989 | 4:3,886,864-3,889,920 | - | C1H4g18120 | C2H4g24204 | LOC_Os04g08370 | Os04g0165900 | - | Detail |
| CX4g036485 | 4:3,892,132-3,892,314 | - | - | - | LOC_Os01g05330 | - | - | Detail |
| CX4g036344 | 4:3,908,423-3,912,677 | - | C1H4g16596 | C2H4g25306 | LOC_Os04g08410 | Os04g0166400 | - | Detail |
| CX4g032015 | 4:3,915,725-3,915,913 | + | - | - | - | - | - | Detail |
| CX4g034148 | 4:3,920,368-3,920,604 | - | - | - | LOC_Os04g08415 | Os04g0166500 | - | Detail |
| CX4g036063 | 4:3,931,583-3,933,207 | + | C1H4g13488 | C2H4g16904 | LOC_Os04g08450 | Os04g0166600 | OsSFL1 | Detail |
| CX4g035524 | 4:3,939,337-3,939,612 | - | - | - | - | - | - | Detail |
| CX4g033810 | 4:3,949,230-3,951,122 | + | C1H4g11999 | C2H4g26054 | LOC_Os04g08460 | - | - | Detail |
| CX4g033225 | 4:3,990,619-3,993,164 | - | C1H4g21471 | C2H4g21134 | LOC_Os04g08550 | Os04g0167800 | - | Detail |
| CX4g034291 | 4:3,997,091-4,002,609 | - | C1H4g27562 | C2H4g04423 | - | Os04g0167875 | - | Detail |
| CX4g032052 | 4:4,003,829-4,004,465 | - | C1H4g05004 | C2H4g02316 | LOC_Os04g08570 | Os04g0168000 | - | Detail |
| CX4g034069 | 4:4,025,239-4,025,706 | - | C1H4g17104 | - | LOC_Os04g08600 | Os04g0168100 | SRO | Detail |
| CX4g035783 | 4:4,035,258-4,035,464 | + | - | - | - | - | - | Detail |
| CX4g033178 | 4:4,048,304-4,049,509 | - | - | C2H4g06670 | - | Os04g0456200 | - | Detail |
| CX4g032734 | 4:4,063,908-4,064,099 | + | - | - | - | - | - | Detail |
| CX4g036254 | 4:4,086,177-4,086,623 | - | C1H4g08725 | - | LOC_Os04g08730 | - | - | Detail |
| CX4g033888 | 4:4,093,525-4,096,186 | + | C1H4g12046 | C2H4g13508 | LOC_Os04g08740 | Os04g0169100 | ETR2, OsETR2, OS-ETR2, etr2, OsPK1, PK1, ERL1, OsERL1, OsERS3 | Detail |