| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g27186 | 12:8,027,831-8,030,743 | - | - | - | - | - | - | Detail |
| C1H12g22810 | 12:8,032,441-8,033,926 | - | C2H3g23130 | - | - | - | - | Detail |
| C1H12g30337 | 12:8,046,615-8,050,263 | + | C2H12g15577 | CX12g015656 | LOC_Os12g16620 | - | - | Detail |
| C1H12g12690 | 12:8,062,533-8,063,063 | + | C2H12g13804 | CX12g016493 | LOC_Os12g16640 | Os12g0267100 | - | Detail |
| C1H12g01774 | 12:8,065,294-8,065,512 | - | - | - | - | - | - | Detail |
| C1H12g04576 | 12:8,065,437-8,074,333 | + | C2H12g25263 | CX12g016493 | LOC_Os12g16650 | Os12g0267200 | - | Detail |
| C1H12g20271 | 12:8,081,573-8,081,926 | + | - | - | - | - | - | Detail |
| C1H12g26358 | 12:8,081,955-8,082,293 | + | C2H12g29205 | CX12g015504 | LOC_Os12g16670 | Os12g0267500 | - | Detail |
| C1H12g26040 | 12:8,086,905-8,092,004 | - | C2H5g06041 | CX9g058196 | LOC_Os10g29274 | Os10g0428200 | - | Detail |
| C1H12g24303 | 12:8,098,217-8,098,549 | + | C2H12g22341 | CX12g016418 | LOC_Os12g16370 | - | - | Detail |
| C1H12g20439 | 12:8,103,063-8,105,960 | + | C2H12g01086 | CX12g016003 | LOC_Os12g16690 | Os12g0267900 | - | Detail |
| C1H12g24834 | 12:8,116,448-8,118,408 | - | C2H12g04535 | CX12g018224 | LOC_Os12g16720 | Os12g0268000 | SL, OsSL, CYP71P1, LLM1, CYP71A1, T5H | Detail |
| C1H12g27646 | 12:8,194,063-8,199,131 | - | C2H12g04709 | CX12g016443 | LOC_Os12g17070 | - | - | Detail |
| C1H12g23758 | 12:8,214,290-8,217,091 | + | C2H12g27718 | CX12g015910 | LOC_Os12g17080 | Os12g0270200 | OGR1, ogr1 | Detail |
| C1H12g29906 | 12:8,219,778-8,221,352 | - | C2H12g03089 | CX12g018649 | LOC_Os12g17090 | Os12g0270300 | - | Detail |
| C1H12g00865 | 12:8,235,806-8,236,450 | - | C2H12g03089 | CX12g016852 | LOC_Os12g17090 | Os12g0270675 | - | Detail |
| C1H12g14089 | 12:8,252,859-8,254,623 | - | C2H12g03089 | CX12g016852 | LOC_Os12g17140 | Os12g0270675 | - | Detail |
| C1H12g01259 | 12:8,274,379-8,275,645 | - | - | - | - | - | - | Detail |
| C1H12g31898 | 12:8,277,268-8,279,819 | + | - | - | - | Os12g0231600 | - | Detail |
| C1H12g17449 | 12:8,295,784-8,297,542 | - | C2H12g14706 | CX12g017972 | LOC_Os12g17160 | Os12g0270900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g034065 | 4:3,224,137-3,227,245 | - | C1H4g27704 | C2H4g30305 | LOC_Os01g63380 | Os04g0615900 | - | Detail |
| CX4g034028 | 4:3,259,162-3,259,755 | + | - | - | LOC_Os07g17100 | - | - | Detail |
| CX4g033304 | 4:3,269,634-3,270,284 | - | C1H4g20470 | C2H4g24428 | - | Os04g0155750 | - | Detail |
| CX4g035506 | 4:3,269,679-3,271,727 | + | C1H4g16605 | C2H4g06170 | LOC_Os04g07250 | Os04g0156000 | - | Detail |
| CX4g034341 | 4:3,275,336-3,277,504 | + | C1H4g23976 | C2H4g17942 | LOC_Os04g07110 | Os04g0154800 | - | Detail |
| CX4g034079 | 4:3,293,482-3,295,832 | + | C1H4g18551 | C2H4g19281 | LOC_Os04g07890 | Os04g0156200 | - | Detail |
| CX4g031884 | 4:3,300,101-3,302,548 | + | C1H4g30323 | C2H4g20575 | LOC_Os04g07920 | Os04g0161400 | - | Detail |
| CX4g033462 | 4:3,304,261-3,305,023 | - | C1H4g00067 | C2H4g00652 | LOC_Os04g07970 | - | - | Detail |
| CX4g033812 | 4:3,309,546-3,311,927 | + | C1H4g27809 | C2H4g21151 | LOC_Os04g09770 | Os04g0161850 | - | Detail |
| CX4g033482 | 4:3,337,641-3,345,491 | + | C1H4g23976 | C2H4g06170 | LOC_Os04g08080 | Os04g0154800 | - | Detail |
| CX4g033942 | 4:3,347,979-3,348,977 | + | C1H4g14091 | C2H4g16966 | LOC_Os04g07830 | Os04g0155000 | - | Detail |
| CX4g033540 | 4:3,351,607-3,355,927 | + | C1H4g18551 | C2H4g19281 | LOC_Os04g07890 | Os04g0155200 | - | Detail |
| CX4g031692 | 4:3,357,341-3,357,559 | - | - | - | - | - | - | Detail |
| CX4g036623 | 4:3,426,480-3,428,375 | + | - | - | - | Os12g0292200 | - | Detail |
| CX4g031528 | 4:3,484,831-3,485,184 | - | - | - | - | - | - | Detail |
| CX4g034106 | 4:3,498,386-3,500,787 | + | C1H4g01540 | C2H4g06576 | LOC_Os04g07890 | Os04g0155200 | - | Detail |
| CX4g033162 | 4:3,571,708-3,571,944 | + | - | - | LOC_Os04g10110 | - | - | Detail |
| CX4g035400 | 4:3,588,065-3,589,354 | - | C1H4g15337 | C2H4g06548 | LOC_Os04g07830 | Os04g0160600 | - | Detail |
| CX4g033885 | 4:3,629,872-3,631,967 | + | C1H4g12963 | C2H4g27562 | LOC_Os04g07890 | Os04g0161100 | - | Detail |
| CX4g035965 | 4:3,649,305-3,649,535 | - | - | - | LOC_Os04g14390 | - | - | Detail |