| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g08572 | 4:29,855,577-29,857,642 | + | C1H4g24892 | CX4g035752 | LOC_Os04g57880 | Os04g0675400 | - | Detail |
| C2H4g03210 | 4:29,861,813-29,866,308 | - | C1H4g19584 | CX4g032155 | LOC_Os04g57890 | Os04g0675500 | - | Detail |
| C2H4g24087 | 4:29,868,732-29,870,351 | - | - | CX4g031866 | LOC_Os04g57900 | Os04g0675600 | - | Detail |
| C2H4g26109 | 4:29,871,167-29,873,030 | - | C1H4g03017 | CX4g033223 | LOC_Os04g57910 | Os04g0675700 | - | Detail |
| C2H4g00320 | 4:29,874,980-29,878,987 | - | C1H4g18368 | CX4g033223 | LOC_Os04g57920 | Os04g0675800 | - | Detail |
| C2H4g07538 | 4:29,879,468-29,880,875 | + | C1H4g11221 | CX4g035153 | LOC_Os04g57930 | Os04g0676100 | - | Detail |
| C2H4g16554 | 4:29,881,887-29,883,437 | - | - | CX4g033361 | LOC_Os04g57940 | Os04g0676200 | - | Detail |
| C2H4g21711 | 4:29,885,118-29,889,442 | + | C1H4g30601 | CX4g031832 | LOC_Os04g57950 | Os04g0676300 | OsDHODH | Detail |
| C2H4g21186 | 4:29,898,050-29,898,922 | + | C1H4g28865 | CX4g036554 | LOC_Os04g57970 | Os04g0676400 | - | Detail |
| C2H4g04552 | 4:29,899,350-29,901,923 | + | C1H4g28865 | - | - | - | - | Detail |
| C2H4g10791 | 4:29,904,046-29,908,373 | - | C1H4g01682 | CX4g035344 | LOC_Os04g58000 | Os04g0676600 | OsL1 | Detail |
| C2H4g20019 | 4:29,913,908-29,918,756 | - | C1H4g27509 | CX4g035344 | LOC_Os04g58010 | Os04g0676650 | OsLFL2 | Detail |
| C2H4g23091 | 4:29,921,299-29,924,954 | - | C1H4g18362 | CX4g033282 | LOC_Os04g58020 | Os04g0676700 | - | Detail |
| C2H4g01061 | 4:29,927,460-29,931,441 | + | C1H4g08360 | CX4g031920 | LOC_Os04g58060 | Os04g0677066 | OsPRMT6b | Detail |
| C2H4g04394 | 4:29,932,889-29,934,301 | - | - | CX4g034001 | LOC_Os04g58070 | Os04g0677100 | - | Detail |
| C2H4g10742 | 4:29,940,363-29,941,934 | + | - | CX4g034936 | LOC_Os04g58080 | Os04g0677200 | - | Detail |
| C2H4g20980 | 4:29,942,833-29,943,603 | - | - | CX4g033431 | LOC_Os04g58090 | Os04g0677300 | - | Detail |
| C2H4g13850 | 4:29,946,590-29,950,314 | - | C1H4g21826 | CX4g033098 | LOC_Os04g58100 | Os04g0677400 | - | Detail |
| C2H4g08366 | 4:29,951,080-29,954,713 | - | C1H4g16702 | CX4g036332 | LOC_Os04g58110 | Os04g0677500 | - | Detail |
| C2H4g27579 | 4:29,958,139-29,958,717 | + | - | CX4g033867 | LOC_Os04g58120 | Os04g0677600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g031547 | 4:1,526,414-1,529,733 | + | C1H4g02839 | C2H4g13802 | LOC_Os04g04030 | Os04g0129600 | - | Detail |
| CX4g036540 | 4:1,534,736-1,536,769 | - | C1H4g09325 | - | LOC_Os04g04060 | Os04g0129900 | - | Detail |
| CX4g032974 | 4:1,537,935-1,538,429 | - | C1H4g24046 | - | LOC_Os04g04070 | Os04g0130433 | - | Detail |
| CX4g035596 | 4:1,575,181-1,575,492 | + | - | - | - | - | - | Detail |
| CX4g032607 | 4:1,587,855-1,588,019 | - | C1H4g31119 | C2H4g13050 | LOC_Os02g47340 | - | - | Detail |
| CX4g034147 | 4:1,588,687-1,588,944 | - | C1H4g14310 | - | - | - | - | Detail |
| CX4g035468 | 4:1,600,270-1,600,446 | + | - | - | - | - | - | Detail |
| CX4g034872 | 4:1,602,390-1,603,914 | + | C1H4g22697 | - | - | - | - | Detail |
| CX4g032459 | 4:1,609,517-1,609,870 | - | - | C2H12g28081 | LOC_Os01g54740 | Os06g0629362 | - | Detail |
| CX4g031666 | 4:1,610,733-1,610,939 | - | - | - | - | - | - | Detail |
| CX4g034087 | 4:1,619,991-1,631,857 | - | C1H4g25848 | C2H4g01852 | LOC_Os04g04254 | Os04g0131900 | CTB2 | Detail |
| CX4g033436 | 4:1,648,628-1,654,796 | + | C1H4g04462 | C2H4g08446 | LOC_Os04g04320 | Os04g0132300 | - | Detail |
| CX4g036248 | 4:1,664,757-1,668,763 | + | C1H4g17799 | C2H4g30640 | LOC_Os04g04330 | Os04g0132500 | CTB4a, OsRLCK127, RLCK127 | Detail |
| CX4g032615 | 4:1,669,938-1,670,138 | - | - | - | - | - | - | Detail |
| CX4g034832 | 4:1,684,642-1,685,223 | - | C1H4g19447 | C2H4g19144 | - | - | - | Detail |
| CX4g033781 | 4:1,688,607-1,688,855 | - | - | - | - | - | - | Detail |
| CX4g036372 | 4:1,706,252-1,706,611 | - | - | - | - | - | - | Detail |
| CX4g031789 | 4:1,707,330-1,707,503 | - | - | - | - | Os01g0728000 | - | Detail |
| CX4g032097 | 4:1,710,105-1,712,567 | + | C1H4g23533 | C2H4g05610 | LOC_Os04g04750 | Os04g0134800 | - | Detail |
| CX4g035198 | 4:1,722,132-1,724,708 | - | C1H4g07028 | C2H4g00703 | LOC_Os04g05470 | - | - | Detail |