| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g29843 | 1:31,135,501-31,136,993 | + | C2H1g27136 | CX1g005345 | LOC_Os01g60520 | Os01g0820700 | - | Detail |
| C1H1g01098 | 1:31,145,075-31,146,136 | - | - | - | - | - | - | Detail |
| C1H1g00049 | 1:31,145,331-31,146,155 | + | - | CX2g019709 | - | - | - | Detail |
| C1H1g16541 | 1:31,149,382-31,151,772 | - | C2H1g23568 | CX1g000164 | LOC_Os01g60600 | Os01g0821300 | OsWRKY108 | Detail |
| C1H1g30388 | 1:31,164,583-31,165,608 | + | C2H1g21075 | CX1g007027 | LOC_Os01g60640 | Os01g0821600 | OsWRKY21 | Detail |
| C1H1g25043 | 1:31,166,201-31,169,757 | - | C2H1g25538 | CX1g000406 | LOC_Os01g60650 | Os01g0821700 | - | Detail |
| C1H1g31255 | 1:31,170,851-31,176,045 | - | C2H1g28094 | CX1g005983 | LOC_Os01g60660 | Os01g0821800 | - | Detail |
| C1H1g11845 | 1:31,180,689-31,184,531 | - | C2H1g18116 | CX1g006557 | LOC_Os01g60670 | Os01g0821900 | - | Detail |
| C1H1g18880 | 1:31,193,272-31,193,784 | + | - | CX1g000167 | LOC_Os01g60690 | - | - | Detail |
| C1H1g15412 | 1:31,195,025-31,199,567 | - | C2H1g14856 | CX1g001048 | LOC_Os01g60700 | Os01g0822200 | - | Detail |
| C1H1g02148 | 1:31,219,932-31,220,573 | - | C2H1g21565 | CX1g001275 | LOC_Os01g60730 | Os01g0822800 | - | Detail |
| C1H1g07733 | 1:31,230,688-31,231,056 | - | C2H1g07180 | CX1g000376 | LOC_Os01g60740 | Os01g0822900 | - | Detail |
| C1H1g31069 | 1:31,242,394-31,243,625 | + | C2H1g28179 | CX1g003897 | LOC_Os01g60770 | Os01g0823100 | - | Detail |
| C1H1g19421 | 1:31,246,524-31,249,528 | + | C2H1g29199 | - | LOC_Os01g60780 | Os01g0823200 | - | Detail |
| C1H1g09909 | 1:31,250,554-31,252,257 | + | C2H1g01001 | CX1g001859 | LOC_Os01g60790 | Os01g0823300 | - | Detail |
| C1H1g09299 | 1:31,253,135-31,255,481 | + | C2H1g22329 | CX1g000409 | LOC_Os01g60800 | Os01g0823400 | - | Detail |
| C1H1g21052 | 1:31,266,017-31,267,159 | - | C2H1g09030 | CX1g003073 | LOC_Os01g60810 | Os01g0823500 | OsOFP6 | Detail |
| C1H1g15235 | 1:31,274,585-31,275,392 | + | C2H1g28368 | CX1g000050 | LOC_Os01g60830 | Os01g0823600 | - | Detail |
| C1H1g00815 | 1:31,275,774-31,277,087 | - | C2H1g25336 | CX1g001515 | LOC_Os01g60850 | Os01g0823700 | - | Detail |
| C1H1g10410 | 1:31,277,816-31,279,173 | + | C2H1g21565 | CX1g002608 | LOC_Os01g58780 | Os01g0690333 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g031547 | 4:1,526,414-1,529,733 | + | C1H4g02839 | C2H4g13802 | LOC_Os04g04030 | Os04g0129600 | - | Detail |
| CX4g036540 | 4:1,534,736-1,536,769 | - | C1H4g09325 | - | LOC_Os04g04060 | Os04g0129900 | - | Detail |
| CX4g032974 | 4:1,537,935-1,538,429 | - | C1H4g24046 | - | LOC_Os04g04070 | Os04g0130433 | - | Detail |
| CX4g035596 | 4:1,575,181-1,575,492 | + | - | - | - | - | - | Detail |
| CX4g032607 | 4:1,587,855-1,588,019 | - | C1H4g31119 | C2H4g13050 | LOC_Os02g47340 | - | - | Detail |
| CX4g034147 | 4:1,588,687-1,588,944 | - | C1H4g14310 | - | - | - | - | Detail |
| CX4g035468 | 4:1,600,270-1,600,446 | + | - | - | - | - | - | Detail |
| CX4g034872 | 4:1,602,390-1,603,914 | + | C1H4g22697 | - | - | - | - | Detail |
| CX4g032459 | 4:1,609,517-1,609,870 | - | - | C2H12g28081 | LOC_Os01g54740 | Os06g0629362 | - | Detail |
| CX4g031666 | 4:1,610,733-1,610,939 | - | - | - | - | - | - | Detail |
| CX4g034087 | 4:1,619,991-1,631,857 | - | C1H4g25848 | C2H4g01852 | LOC_Os04g04254 | Os04g0131900 | CTB2 | Detail |
| CX4g033436 | 4:1,648,628-1,654,796 | + | C1H4g04462 | C2H4g08446 | LOC_Os04g04320 | Os04g0132300 | - | Detail |
| CX4g036248 | 4:1,664,757-1,668,763 | + | C1H4g17799 | C2H4g30640 | LOC_Os04g04330 | Os04g0132500 | CTB4a, OsRLCK127, RLCK127 | Detail |
| CX4g032615 | 4:1,669,938-1,670,138 | - | - | - | - | - | - | Detail |
| CX4g034832 | 4:1,684,642-1,685,223 | - | C1H4g19447 | C2H4g19144 | - | - | - | Detail |
| CX4g033781 | 4:1,688,607-1,688,855 | - | - | - | - | - | - | Detail |
| CX4g036372 | 4:1,706,252-1,706,611 | - | - | - | - | - | - | Detail |
| CX4g031789 | 4:1,707,330-1,707,503 | - | - | - | - | Os01g0728000 | - | Detail |
| CX4g032097 | 4:1,710,105-1,712,567 | + | C1H4g23533 | C2H4g05610 | LOC_Os04g04750 | Os04g0134800 | - | Detail |
| CX4g035198 | 4:1,722,132-1,724,708 | - | C1H4g07028 | C2H4g00703 | LOC_Os04g05470 | - | - | Detail |