| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g06309 | 6:7,869,827-7,871,431 | - | C2H6g03633 | CX6g041297 | LOC_Os06g16170 | Os06g0272900 | OsXyBAT5 | Detail |
| C1H6g24810 | 6:7,881,763-7,884,113 | + | C2H6g10725 | CX6g044106 | LOC_Os06g16200 | Os06g0273200 | - | Detail |
| C1H6g17306 | 6:7,892,626-7,893,921 | + | C2H6g14556 | CX6g041716 | LOC_Os06g16240 | Os06g0273500 | OsXyBAT4 | Detail |
| C1H6g00477 | 6:7,910,915-7,915,749 | - | C2H6g20773 | CX6g044070 | LOC_Os06g16260 | Os06g0273800 | - | Detail |
| C1H6g08502 | 6:7,918,022-7,919,566 | + | C2H6g24601 | - | LOC_Os06g16270 | Os06g0274000 | OsHSBP2 | Detail |
| C1H6g27290 | 6:7,921,189-7,935,858 | - | C2H6g12328 | CX6g041389 | LOC_Os06g16280 | Os06g0274100 | - | Detail |
| C1H6g22454 | 6:7,937,891-7,939,984 | + | C2H6g29411 | CX6g041342 | LOC_Os06g16290 | Os06g0274200 | - | Detail |
| C1H6g18150 | 6:7,946,124-7,947,825 | + | C2H6g06933 | CX6g044242 | LOC_Os06g16300 | Os06g0274300 | - | Detail |
| C1H6g11842 | 6:7,958,402-7,966,238 | + | C2H6g23301 | CX6g042085 | LOC_Os06g16330 | Os06g0274500 | OsSERL2 | Detail |
| C1H6g22322 | 6:7,967,759-7,969,743 | - | C2H6g18739 | CX6g044203 | LOC_Os06g16350 | Os06g0274800 | - | Detail |
| C1H6g28161 | 6:7,974,302-7,977,091 | + | C2H6g26801 | CX6g043973 | LOC_Os06g16370 | Os06g0275000 | SE1, Se1(Lm, Lf, Rs, Fl), se(t), Hd1, HD1, Fl, Lm, Se1, K, Rs, Lf, Se-1, Hd1(t), qHD1(t), OsA, OsBBX18, Hd1/OsA, OsCCT21 | Detail |
| C1H6g25706 | 6:7,981,386-7,983,499 | - | C2H6g26383 | - | - | - | - | Detail |
| C1H6g22180 | 6:7,994,210-8,002,603 | + | C2H6g04388 | CX6g042350 | LOC_Os06g16390 | Os06g0275500 | CLF, OsSET24, SDG711, EZ1, OsCLF | Detail |
| C1H6g11424 | 6:8,004,198-8,015,424 | + | C2H6g05369 | CX6g043166 | LOC_Os06g16400 | Os06g0275600 | - | Detail |
| C1H6g04853 | 6:8,015,545-8,020,532 | - | C2H6g15127 | CX6g045943 | LOC_Os06g16410 | Os06g0275700 | - | Detail |
| C1H6g01958 | 6:8,035,270-8,038,178 | + | C2H6g23432 | CX6g044340 | LOC_Os06g16420 | Os06g0275800 | - | Detail |
| C1H6g15789 | 6:8,039,966-8,047,464 | + | C2H6g19168 | CX6g045397 | LOC_Os06g16430 | Os06g0275900 | - | Detail |
| C1H6g04878 | 6:8,178,268-8,180,849 | - | C2H6g13388 | CX6g042959 | LOC_Os06g16640 | Os06g0278000 | - | Detail |
| C1H6g18405 | 6:8,290,588-8,306,425 | - | C2H6g14158 | CX6g045347 | LOC_Os06g16980 | Os06g0281400 | - | Detail |
| C1H6g06414 | 6:8,307,246-8,307,530 | - | C2H6g29390 | CX6g042329 | LOC_Os06g16990 | Os06g0281550 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g031547 | 4:1,526,414-1,529,733 | + | C1H4g02839 | C2H4g13802 | LOC_Os04g04030 | Os04g0129600 | - | Detail |
| CX4g036540 | 4:1,534,736-1,536,769 | - | C1H4g09325 | - | LOC_Os04g04060 | Os04g0129900 | - | Detail |
| CX4g032974 | 4:1,537,935-1,538,429 | - | C1H4g24046 | - | LOC_Os04g04070 | Os04g0130433 | - | Detail |
| CX4g035596 | 4:1,575,181-1,575,492 | + | - | - | - | - | - | Detail |
| CX4g032607 | 4:1,587,855-1,588,019 | - | C1H4g31119 | C2H4g13050 | LOC_Os02g47340 | - | - | Detail |
| CX4g034147 | 4:1,588,687-1,588,944 | - | C1H4g14310 | - | - | - | - | Detail |
| CX4g035468 | 4:1,600,270-1,600,446 | + | - | - | - | - | - | Detail |
| CX4g034872 | 4:1,602,390-1,603,914 | + | C1H4g22697 | - | - | - | - | Detail |
| CX4g032459 | 4:1,609,517-1,609,870 | - | - | C2H12g28081 | LOC_Os01g54740 | Os06g0629362 | - | Detail |
| CX4g031666 | 4:1,610,733-1,610,939 | - | - | - | - | - | - | Detail |
| CX4g034087 | 4:1,619,991-1,631,857 | - | C1H4g25848 | C2H4g01852 | LOC_Os04g04254 | Os04g0131900 | CTB2 | Detail |
| CX4g033436 | 4:1,648,628-1,654,796 | + | C1H4g04462 | C2H4g08446 | LOC_Os04g04320 | Os04g0132300 | - | Detail |
| CX4g036248 | 4:1,664,757-1,668,763 | + | C1H4g17799 | C2H4g30640 | LOC_Os04g04330 | Os04g0132500 | CTB4a, OsRLCK127, RLCK127 | Detail |
| CX4g032615 | 4:1,669,938-1,670,138 | - | - | - | - | - | - | Detail |
| CX4g034832 | 4:1,684,642-1,685,223 | - | C1H4g19447 | C2H4g19144 | - | - | - | Detail |
| CX4g033781 | 4:1,688,607-1,688,855 | - | - | - | - | - | - | Detail |
| CX4g036372 | 4:1,706,252-1,706,611 | - | - | - | - | - | - | Detail |
| CX4g031789 | 4:1,707,330-1,707,503 | - | - | - | - | Os01g0728000 | - | Detail |
| CX4g032097 | 4:1,710,105-1,712,567 | + | C1H4g23533 | C2H4g05610 | LOC_Os04g04750 | Os04g0134800 | - | Detail |
| CX4g035198 | 4:1,722,132-1,724,708 | - | C1H4g07028 | C2H4g00703 | LOC_Os04g05470 | - | - | Detail |