| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g08088 | 1:23,044,591-23,047,367 | + | C1H1g31055 | CX1g002458 | LOC_Os01g45350 | Os01g0640600 | - | Detail |
| C2H1g22980 | 1:23,046,848-23,048,906 | - | C1H1g10058 | CX1g004617 | LOC_Os01g45360 | Os01g0640700 | - | Detail |
| C2H1g13504 | 1:23,051,648-23,054,849 | - | C1H1g19962 | CX1g003997 | LOC_Os01g45370 | Os01g0640800 | - | Detail |
| C2H1g09207 | 1:23,055,650-23,059,742 | + | C1H1g17185 | CX1g000116 | LOC_Os01g45380 | Os01g0641000 | - | Detail |
| C2H1g17482 | 1:23,061,086-23,064,129 | + | C1H1g25061 | CX1g004780 | LOC_Os01g45390 | Os01g0641100 | - | Detail |
| C2H1g02385 | 1:23,078,541-23,081,482 | - | C1H1g31552 | CX1g004195 | LOC_Os01g45439 | Os01g0641700 | - | Detail |
| C2H1g03402 | 1:23,086,625-23,088,923 | + | C1H1g00902 | CX1g003051 | LOC_Os01g45450 | Os01g0641800 | - | Detail |
| C2H1g07647 | 1:23,090,833-23,091,147 | + | C1H1g12918 | CX1g005344 | LOC_Os01g45460 | Os01g0642000 | - | Detail |
| C2H1g14331 | 1:23,091,174-23,098,582 | + | C1H1g12918 | CX1g005344 | LOC_Os01g45460 | Os01g0642100 | - | Detail |
| C2H1g23910 | 1:23,098,762-23,099,498 | - | C1H1g06064 | - | LOC_Os01g45470 | Os01g0642200 | - | Detail |
| C2H1g05902 | 1:23,132,843-23,134,398 | + | C1H1g02209 | CX1g000192 | LOC_Os01g45520 | Os01g0642801 | - | Detail |
| C2H1g10748 | 1:23,134,990-23,137,497 | - | C1H1g26078 | CX1g001242 | LOC_Os01g45530 | Os01g0642900 | - | Detail |
| C2H1g09079 | 1:23,137,588-23,138,064 | - | C1H1g26078 | CX1g001242 | LOC_Os01g45530 | Os01g0642900 | - | Detail |
| C2H1g05185 | 1:23,155,106-23,159,500 | + | C1H1g21876 | CX1g003646 | LOC_Os01g45550 | Os01g0643300 | - | Detail |
| C2H1g02636 | 1:23,170,308-23,173,345 | - | C1H1g25133 | CX1g003628 | LOC_Os01g45570 | Os01g0643600 | SGD2, OsHOX3, SGD2/OsHOX3 | Detail |
| C2H1g17274 | 1:23,188,624-23,193,473 | - | C1H1g17824 | CX1g005269 | LOC_Os01g45620 | Os01g0643800 | - | Detail |
| C2H1g01755 | 1:23,197,092-23,198,684 | + | C1H1g14596 | CX1g004663 | LOC_Os01g45640 | Os01g0644000 | - | Detail |
| C2H1g00660 | 1:23,216,768-23,217,823 | - | C1H1g08154 | CX1g003016 | LOC_Os01g45730 | Os01g0645000 | - | Detail |
| C2H1g06994 | 1:23,226,508-23,233,386 | + | C1H1g06404 | CX1g001972 | LOC_Os01g45750 | Os01g0645200 | - | Detail |
| C2H1g23683 | 1:23,246,717-23,248,981 | + | C1H1g20018 | CX1g005018 | LOC_Os01g45760 | Os01g0645400 | YUCCA1, OsYUCCA1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g004410 | 1:18,539,565-18,542,202 | - | C1H1g27885 | C2H1g28449 | LOC_Os01g36560 | Os01g0546100 | - | Detail |
| CX1g004955 | 1:18,544,641-18,545,327 | + | - | - | LOC_Os01g36570 | Os01g0546250 | - | Detail |
| CX1g005411 | 1:18,553,666-18,564,271 | - | C1H1g03906 | C2H1g26658 | LOC_Os01g36580 | Os01g0546400 | - | Detail |
| CX1g004289 | 1:18,567,037-18,568,092 | - | C1H1g31287 | C2H1g29383 | LOC_Os01g36600 | Os01g0546500 | - | Detail |
| CX1g003967 | 1:18,568,279-18,570,069 | + | C1H1g12269 | C2H1g11812 | LOC_Os01g36610 | Os01g0546700 | - | Detail |
| CX1g005136 | 1:18,571,564-18,572,673 | - | C1H1g29970 | C2H1g29663 | LOC_Os01g36620 | Os01g0546800 | OsPSE1, OsPLL1 | Detail |
| CX1g000906 | 1:18,593,985-18,596,702 | + | C1H1g24472 | C2H1g08239 | LOC_Os01g36640 | Os01g0547000 | - | Detail |
| CX1g005826 | 1:18,604,192-18,604,851 | + | - | - | - | - | - | Detail |
| CX1g000363 | 1:18,607,656-18,611,241 | - | C1H1g20403 | C2H1g12072 | LOC_Os01g36660 | Os01g0547133 | - | Detail |
| CX1g001511 | 1:18,614,307-18,615,307 | - | - | - | - | Os01g0728000 | - | Detail |
| CX1g002050 | 1:18,622,786-18,635,419 | - | C1H1g00906 | C2H1g04719 | LOC_Os01g36670 | Os01g0547200 | ZBED | Detail |
| CX1g002790 | 1:18,646,888-18,649,104 | - | C1H1g09182 | C2H1g28243 | LOC_Os01g36720 | Os01g0547600 | NRT2.4, OsNRT2.4 | Detail |
| CX1g001865 | 1:18,693,770-18,693,940 | + | - | - | - | - | - | Detail |
| CX1g002199 | 1:18,696,875-18,701,281 | - | C1H1g04544 | C2H1g04817 | LOC_Os01g36790 | Os01g0548600 | - | Detail |
| CX1g001738 | 1:18,709,110-18,709,556 | - | C1H1g05325 | C2H1g15536 | LOC_Os01g36820 | Os01g0548900 | - | Detail |
| CX1g001921 | 1:18,716,088-18,718,535 | + | C1H1g02071 | C2H1g02901 | LOC_Os01g36830 | Os01g0549000 | - | Detail |
| CX1g007010 | 1:18,719,494-18,731,390 | - | C1H1g25951 | C2H1g03993 | LOC_Os01g36840 | Os01g0549200 | - | Detail |
| CX1g004490 | 1:18,747,518-18,752,886 | + | C1H1g24716 | C2H1g22202 | LOC_Os01g36860 | Os01g0549400 | - | Detail |
| CX1g006486 | 1:18,761,455-18,765,921 | - | C1H1g16520 | C2H1g01377 | LOC_Os01g36870 | Os01g0549500 | - | Detail |
| CX1g004497 | 1:18,767,523-18,772,224 | + | C1H1g20457 | C2H1g04678 | LOC_Os01g36890 | Os01g0549700 | - | Detail |