| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g11764 | 3:10,956,693-10,961,163 | - | C2H3g10583 | CX3g025440 | LOC_Os03g21490 | Os03g0332700 | - | Detail |
| C1H3g02450 | 3:10,968,065-10,973,057 | + | C2H3g24190 | CX3g027316 | LOC_Os03g21510 | Os03g0332900 | - | Detail |
| C1H3g13994 | 3:10,973,249-10,978,463 | - | C2H3g30311 | CX3g028180 | LOC_Os03g21520 | Os03g0333000 | - | Detail |
| C1H3g12459 | 3:10,978,644-10,988,938 | + | C2H3g26938 | CX3g029941 | LOC_Os03g21530 | Os03g0333100 | - | Detail |
| C1H3g29664 | 3:10,990,193-10,992,877 | + | C2H3g19269 | CX3g028103 | LOC_Os03g21540 | Os03g0333200 | DRUS1, OsCrRLK1L8, CrRLK1L8, FLR1 | Detail |
| C1H3g30788 | 3:10,997,102-11,001,582 | + | C2H3g24047 | CX3g028855 | LOC_Os03g21550 | Os03g0333300 | - | Detail |
| C1H3g06087 | 3:11,002,110-11,002,616 | + | C2H3g24886 | CX3g028002 | LOC_Os03g21560 | Os03g0333400 | - | Detail |
| C1H3g12764 | 3:11,005,642-11,009,575 | - | C2H3g01911 | CX3g030167 | LOC_Os03g21620 | Os03g0333500 | - | Detail |
| C1H3g24732 | 3:11,012,916-11,019,204 | + | C2H3g06072 | CX3g030080 | LOC_Os03g21630 | Os03g0334100 | - | Detail |
| C1H3g12242 | 3:11,021,498-11,024,991 | + | C2H3g19486 | CX3g025988 | LOC_Os03g21640 | Os03g0334200 | - | Detail |
| C1H3g12872 | 3:11,025,887-11,026,351 | - | C2H3g01471 | CX3g025425 | LOC_Os03g21650 | Os03g0334300 | - | Detail |
| C1H3g04089 | 3:11,049,298-11,055,428 | + | C2H3g23114 | CX3g028192 | LOC_Os03g21680 | Os03g0334700 | - | Detail |
| C1H3g19863 | 3:11,055,512-11,060,664 | - | C2H3g29675 | CX3g026146 | LOC_Os03g21690 | Os03g0334800 | - | Detail |
| C1H3g05344 | 3:11,063,303-11,064,574 | + | C2H3g22866 | CX3g026406 | LOC_Os03g21700 | Os03g0335100 | - | Detail |
| C1H3g04080 | 3:11,069,158-11,070,960 | + | C2H3g03886 | CX3g025256 | LOC_Os03g21710 | Os03g0335200 | - | Detail |
| C1H3g28568 | 3:11,077,899-11,078,735 | - | - | - | - | - | - | Detail |
| C1H3g16339 | 3:11,078,444-11,078,689 | + | C2H3g08004 | CX3g030092 | - | Os07g0676800 | - | Detail |
| C1H3g19042 | 3:11,081,184-11,087,685 | + | C2H3g20974 | CX3g026559 | LOC_Os03g21720 | Os03g0335300 | - | Detail |
| C1H3g07741 | 3:11,090,089-11,093,974 | + | C2H3g19361 | CX3g030985 | LOC_Os03g21730 | Os03g0335500 | - | Detail |
| C1H3g12959 | 3:11,104,908-11,115,051 | - | C2H3g14995 | CX3g025822 | LOC_Os03g02100 | Os03g0694900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g004410 | 1:18,539,565-18,542,202 | - | C1H1g27885 | C2H1g28449 | LOC_Os01g36560 | Os01g0546100 | - | Detail |
| CX1g004955 | 1:18,544,641-18,545,327 | + | - | - | LOC_Os01g36570 | Os01g0546250 | - | Detail |
| CX1g005411 | 1:18,553,666-18,564,271 | - | C1H1g03906 | C2H1g26658 | LOC_Os01g36580 | Os01g0546400 | - | Detail |
| CX1g004289 | 1:18,567,037-18,568,092 | - | C1H1g31287 | C2H1g29383 | LOC_Os01g36600 | Os01g0546500 | - | Detail |
| CX1g003967 | 1:18,568,279-18,570,069 | + | C1H1g12269 | C2H1g11812 | LOC_Os01g36610 | Os01g0546700 | - | Detail |
| CX1g005136 | 1:18,571,564-18,572,673 | - | C1H1g29970 | C2H1g29663 | LOC_Os01g36620 | Os01g0546800 | OsPSE1, OsPLL1 | Detail |
| CX1g000906 | 1:18,593,985-18,596,702 | + | C1H1g24472 | C2H1g08239 | LOC_Os01g36640 | Os01g0547000 | - | Detail |
| CX1g005826 | 1:18,604,192-18,604,851 | + | - | - | - | - | - | Detail |
| CX1g000363 | 1:18,607,656-18,611,241 | - | C1H1g20403 | C2H1g12072 | LOC_Os01g36660 | Os01g0547133 | - | Detail |
| CX1g001511 | 1:18,614,307-18,615,307 | - | - | - | - | Os01g0728000 | - | Detail |
| CX1g002050 | 1:18,622,786-18,635,419 | - | C1H1g00906 | C2H1g04719 | LOC_Os01g36670 | Os01g0547200 | ZBED | Detail |
| CX1g002790 | 1:18,646,888-18,649,104 | - | C1H1g09182 | C2H1g28243 | LOC_Os01g36720 | Os01g0547600 | NRT2.4, OsNRT2.4 | Detail |
| CX1g001865 | 1:18,693,770-18,693,940 | + | - | - | - | - | - | Detail |
| CX1g002199 | 1:18,696,875-18,701,281 | - | C1H1g04544 | C2H1g04817 | LOC_Os01g36790 | Os01g0548600 | - | Detail |
| CX1g001738 | 1:18,709,110-18,709,556 | - | C1H1g05325 | C2H1g15536 | LOC_Os01g36820 | Os01g0548900 | - | Detail |
| CX1g001921 | 1:18,716,088-18,718,535 | + | C1H1g02071 | C2H1g02901 | LOC_Os01g36830 | Os01g0549000 | - | Detail |
| CX1g007010 | 1:18,719,494-18,731,390 | - | C1H1g25951 | C2H1g03993 | LOC_Os01g36840 | Os01g0549200 | - | Detail |
| CX1g004490 | 1:18,747,518-18,752,886 | + | C1H1g24716 | C2H1g22202 | LOC_Os01g36860 | Os01g0549400 | - | Detail |
| CX1g006486 | 1:18,761,455-18,765,921 | - | C1H1g16520 | C2H1g01377 | LOC_Os01g36870 | Os01g0549500 | - | Detail |
| CX1g004497 | 1:18,767,523-18,772,224 | + | C1H1g20457 | C2H1g04678 | LOC_Os01g36890 | Os01g0549700 | - | Detail |