| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g24523 | 4:20,368,391-20,369,323 | - | C1H4g31685 | CX4g035066 | LOC_Os04g39570 | Os04g0471700 | - | Detail |
| C2H4g28567 | 4:20,369,334-20,371,687 | - | C1H4g31685 | CX4g035066 | LOC_Os04g39570 | Os04g0471700 | - | Detail |
| C2H4g26351 | 4:20,375,278-20,376,191 | - | - | - | - | Os04g0471700 | - | Detail |
| C2H4g00702 | 4:20,384,174-20,385,460 | - | C1H4g16030 | CX4g033693 | LOC_Os04g39590 | Os04g0472100 | - | Detail |
| C2H4g03647 | 4:20,385,815-20,386,597 | - | C1H4g16030 | CX4g032102 | LOC_Os04g39600 | Os04g0472200 | - | Detail |
| C2H4g19420 | 4:20,393,577-20,398,039 | + | C1H4g00073 | CX4g034292 | LOC_Os04g39610 | Os04g0472300 | - | Detail |
| C2H4g22876 | 4:20,403,160-20,410,476 | + | C1H4g27433 | CX4g035839 | LOC_Os04g39629 | Os04g0472400 | - | Detail |
| C2H4g21465 | 4:20,413,737-20,416,103 | + | C1H4g18621 | CX4g035839 | LOC_Os04g39650 | Os04g0472500 | - | Detail |
| C2H4g05936 | 4:20,417,104-20,417,445 | + | C1H4g18621 | CX4g035839 | LOC_Os04g39650 | Os04g0472500 | - | Detail |
| C2H4g04802 | 4:20,418,030-20,419,619 | - | C1H4g12075 | CX4g036049 | LOC_Os04g39660 | - | - | Detail |
| C2H4g02841 | 4:20,419,839-20,422,233 | + | C1H4g21886 | CX4g035542 | LOC_Os04g39670 | Os04g0472700 | - | Detail |
| C2H4g28146 | 4:20,424,851-20,427,436 | + | - | CX4g033721 | LOC_Os04g39680 | Os04g0472900 | - | Detail |
| C2H4g20727 | 4:20,427,911-20,430,021 | - | C1H4g18594 | CX4g031996 | LOC_Os04g39700 | Os04g0473400 | RPL6 | Detail |
| C2H4g02603 | 4:20,431,637-20,432,138 | - | C1H4g22390 | CX4g036319 | LOC_Os04g39770 | Os04g0473800 | FCP1, FCP1/OsCLE402, Os CLE402, OsCLE402 | Detail |
| C2H4g23069 | 4:20,438,019-20,447,937 | - | C1H4g00302 | CX4g034400 | LOC_Os04g39780 | Os04g0473900 | DWA1 | Detail |
| C2H4g27268 | 4:20,465,053-20,466,506 | - | C1H4g22436 | - | LOC_Os04g39864 | Os04g0474500 | - | Detail |
| C2H4g08296 | 4:20,468,818-20,469,627 | - | C1H4g30851 | - | LOC_Os04g39840 | Os04g0474300 | - | Detail |
| C2H4g06810 | 4:20,472,789-20,478,079 | - | C1H4g08294 | - | LOC_Os04g39840 | Os04g0474500 | - | Detail |
| C2H4g06498 | 4:20,479,799-20,485,888 | - | C1H4g25243 | - | LOC_Os04g39840 | Os04g0474500 | - | Detail |
| C2H4g26901 | 4:20,489,101-20,494,194 | - | C1H4g24332 | - | LOC_Os04g39880 | Os04g0474800 | OsTAGG2, Os4BGlu12 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g034307 | 4:1,069,756-1,073,629 | - | C1H4g10566 | C2H4g11798 | LOC_Os04g02870 | Os04g0118900 | OsRS29 | Detail |
| CX4g032763 | 4:1,074,614-1,075,619 | - | - | - | - | - | - | Detail |
| CX4g036463 | 4:1,076,763-1,077,160 | + | C1H4g26984 | C2H4g23600 | LOC_Os04g02880 | Os04g0119000 | - | Detail |
| CX4g034760 | 4:1,080,588-1,083,658 | + | C1H4g01097 | C2H4g06483 | LOC_Os04g02900 | Os04g0119400 | FLO19 | Detail |
| CX4g032462 | 4:1,090,629-1,093,060 | - | C1H4g24475 | C2H4g08482 | LOC_Os04g02910 | Os04g0119500 | - | Detail |
| CX4g034587 | 4:1,095,062-1,095,271 | + | - | - | - | - | - | Detail |
| CX4g034226 | 4:1,097,418-1,097,939 | + | - | - | - | - | - | Detail |
| CX4g031645 | 4:1,100,089-1,106,106 | + | C1H4g07943 | C2H4g19285 | LOC_Os04g02920 | Os04g0119800 | - | Detail |
| CX4g031516 | 4:1,111,138-1,122,478 | + | C1H4g25987 | C2H4g21106 | LOC_Os04g02970 | Os04g0120100 | - | Detail |
| CX4g032545 | 4:1,129,628-1,138,736 | + | C1H4g07856 | C2H4g29838 | LOC_Os04g02980 | Os04g0120300 | - | Detail |
| CX4g036115 | 4:1,157,405-1,158,285 | - | C1H4g20867 | C2H1g15809 | - | - | - | Detail |
| CX4g034661 | 4:1,167,783-1,177,876 | + | C1H4g21533 | C2H4g04444 | LOC_Os04g03050 | Os04g0121100 | - | Detail |
| CX4g032499 | 4:1,181,330-1,186,262 | + | C1H4g12053 | C2H4g12397 | LOC_Os04g03100 | Os04g0121300 | - | Detail |
| CX4g036276 | 4:1,188,557-1,188,893 | + | C1H4g15960 | C2H4g01070 | - | - | - | Detail |
| CX4g033795 | 4:1,203,298-1,203,788 | + | C1H4g21418 | C2H4g10665 | LOC_Os04g03164 | Os04g0121800 | - | Detail |
| CX4g034990 | 4:1,210,043-1,215,554 | - | C1H4g29860 | C2H4g05913 | LOC_Os04g03180 | Os04g0122000 | - | Detail |
| CX4g033551 | 4:1,217,813-1,221,751 | - | C1H4g15787 | C2H4g12847 | LOC_Os04g03210 | Os04g0122200 | - | Detail |
| CX4g035223 | 4:1,227,652-1,228,884 | + | C1H4g18927 | C2H4g15957 | LOC_Os04g03320 | Os04g0123125 | - | Detail |
| CX4g032280 | 4:1,237,352-1,237,507 | + | - | - | - | Os09g0414600 | - | Detail |
| CX4g033227 | 4:1,251,894-1,261,403 | + | C1H4g15411 | C2H4g25246 | LOC_Os04g03810 | Os04g0127200 | - | Detail |