| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g16451 | 6:9,565,443-9,572,739 | - | C2H6g22125 | CX6g041237 | LOC_Os06g20040 | Os06g0304600 | - | Detail |
| C1H6g08869 | 6:9,592,391-9,602,634 | + | C2H6g11429 | CX6g041532 | LOC_Os06g20090 | Os06g0305200 | - | Detail |
| C1H6g20121 | 6:9,603,797-9,605,031 | - | - | - | - | - | - | Detail |
| C1H6g11013 | 6:9,619,499-9,620,995 | + | C2H6g14592 | CX6g042324 | LOC_Os06g20110 | Os06g0305400 | - | Detail |
| C1H6g06042 | 6:9,622,456-9,624,509 | + | C2H6g07528 | CX6g042324 | LOC_Os06g20120 | Os06g0305400 | - | Detail |
| C1H6g25354 | 6:9,628,592-9,631,862 | + | C2H6g07470 | CX6g045687 | LOC_Os06g20140 | Os06g0118000 | - | Detail |
| C1H6g00755 | 6:9,638,057-9,638,511 | + | C2H6g06402 | CX6g045294 | LOC_Os06g20180 | Os06g0306500 | - | Detail |
| C1H6g18397 | 6:9,640,476-9,645,548 | + | C2H6g06402 | CX6g045294 | LOC_Os06g20190 | Os06g0306500 | - | Detail |
| C1H6g22866 | 6:9,678,289-9,679,067 | + | - | - | - | - | - | Detail |
| C1H6g10015 | 6:9,684,050-9,686,449 | - | C2H6g20586 | CX6g043850 | LOC_Os06g21920 | Os06g0324800 | PT9, OsPT9, PHT1-9, OsPht1;9 | Detail |
| C1H6g02709 | 6:9,694,762-9,695,096 | + | C2H6g00738 | CX6g042175 | LOC_Os06g21910 | Os06g0324400 | - | Detail |
| C1H6g04429 | 6:9,704,253-9,708,011 | - | C2H6g18039 | CX6g045787 | LOC_Os06g21900 | Os06g0324300 | - | Detail |
| C1H6g19731 | 6:9,764,813-9,766,491 | - | C2H6g06621 | CX6g041388 | LOC_Os06g21820 | Os06g0323100 | - | Detail |
| C1H6g31747 | 6:9,795,947-9,797,603 | - | C2H6g06621 | CX6g041388 | LOC_Os06g21720 | Os06g0322400 | - | Detail |
| C1H6g09993 | 6:9,861,008-9,866,744 | + | C2H6g15965 | CX6g043034 | LOC_Os06g21600 | Os06g0320700 | - | Detail |
| C1H6g29854 | 6:9,869,699-9,871,226 | - | C2H6g07045 | CX6g043863 | LOC_Os06g21590 | Os06g0320500 | - | Detail |
| C1H6g30433 | 6:9,872,942-9,874,529 | + | - | - | - | - | - | Detail |
| C1H6g15151 | 6:9,884,288-9,888,894 | + | C2H6g13117 | CX6g043671 | LOC_Os06g21570 | Os06g0320200 | Os6BGlu24 | Detail |
| C1H6g07888 | 6:9,889,277-9,892,648 | - | C2H6g00743 | CX6g044452 | LOC_Os06g21560 | Os06g0320100 | - | Detail |
| C1H6g14935 | 6:9,895,203-9,895,714 | + | C2H6g30426 | CX6g045633 | LOC_Os06g21550 | Os06g0320000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g035180 | 4:565,260-568,490 | - | C1H4g18120 | C2H4g18135 | - | Os04g0115800 | - | Detail |
| CX4g033581 | 4:601,648-602,244 | + | C1H4g15865 | - | LOC_Os04g01960 | Os04g0110200 | - | Detail |
| CX4g032566 | 4:607,027-613,275 | + | C1H4g18566 | C2H4g13476 | LOC_Os04g01970 | Os04g0110300 | - | Detail |
| CX4g034294 | 4:615,259-617,793 | + | C1H4g12929 | C2H4g23508 | LOC_Os04g01980 | Os04g0110400 | - | Detail |
| CX4g031552 | 4:619,637-621,232 | - | C1H4g04163 | - | LOC_Os04g01990 | Os04g0110500 | - | Detail |
| CX4g032574 | 4:622,594-627,384 | - | C1H4g08526 | C2H4g21870 | LOC_Os04g02000 | Os04g0110600 | OsSTL1 | Detail |
| CX4g033118 | 4:632,802-632,978 | - | C1H4g29114 | - | - | Os04g0110700 | - | Detail |
| CX4g031548 | 4:633,565-634,502 | - | C1H4g28215 | C2H4g18873 | - | - | - | Detail |
| CX4g031589 | 4:639,635-644,710 | + | C1H4g05772 | C2H4g22392 | LOC_Os04g02040 | Os04g0111100 | - | Detail |
| CX4g035956 | 4:658,854-663,274 | - | C1H4g05772 | C2H4g22392 | LOC_Os04g02030 | Os04g0111100 | - | Detail |
| CX4g035817 | 4:664,986-665,135 | - | - | - | - | - | - | Detail |
| CX4g036450 | 4:666,653-668,409 | + | - | C2H4g08632 | LOC_Os09g25740 | - | - | Detail |
| CX4g034175 | 4:669,174-672,840 | - | C1H4g08342 | C2H4g19107 | LOC_Os04g02050 | Os04g0111200 | - | Detail |
| CX4g031586 | 4:678,307-682,537 | - | C1H4g15454 | C2H4g16798 | LOC_Os04g02140 | Os04g0112200 | OsE2Fc | Detail |
| CX4g033275 | 4:686,068-692,181 | - | C1H4g00631 | C2H4g05319 | LOC_Os04g02150 | Os04g0112300 | - | Detail |
| CX4g032693 | 4:694,622-695,212 | - | - | - | LOC_Os04g02410 | Os04g0114300 | - | Detail |
| CX4g032358 | 4:699,690-702,569 | + | C1H4g07839 | C2H4g29574 | LOC_Os04g02500 | Os04g0115400 | - | Detail |
| CX4g032534 | 4:707,437-710,963 | + | C1H4g24213 | C2H4g06234 | LOC_Os04g02510 | Os04g0115500 | OsTIF1 | Detail |
| CX4g032131 | 4:717,948-723,860 | - | C1H4g26900 | C2H4g07573 | LOC_Os04g02550 | Os04g0115650 | - | Detail |
| CX4g032921 | 4:737,033-740,701 | - | C1H4g27426 | C2H4g18135 | LOC_Os04g02550 | Os04g0115650 | - | Detail |