| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g06044 | 5:8,732,534-8,738,092 | - | C2H5g03374 | CX5g040958 | LOC_Os05g19630 | Os05g0277300 | - | Detail |
| C1H5g02530 | 5:8,760,037-8,760,783 | + | C2H5g20956 | CX5g038137 | LOC_Os05g19670 | Os05g0277500 | - | Detail |
| C1H5g11498 | 5:8,792,083-8,797,263 | - | C2H5g25018 | CX5g037933 | LOC_Os05g19910 | Os05g0278500 | OsFMT, OsFMT1, OsAT5, OsAT5/OsFMT | Detail |
| C1H5g29704 | 5:8,828,494-8,835,493 | - | C2H5g28009 | CX5g039281 | LOC_Os05g19954 | Os05g0279300 | - | Detail |
| C1H5g23736 | 5:8,893,494-8,899,217 | + | C2H5g12080 | CX5g037702 | LOC_Os05g19970 | Os05g0279400 | - | Detail |
| C1H5g23078 | 5:8,917,761-8,927,257 | + | C2H5g08718 | CX5g039549 | LOC_Os05g19974 | Os05g0279600 | - | Detail |
| C1H5g13096 | 5:8,934,229-8,937,379 | + | C2H5g23273 | CX5g039172 | LOC_Os05g20020 | Os05g0279900 | - | Detail |
| C1H5g28156 | 5:8,974,209-8,975,740 | + | C2H5g23868 | CX5g039890 | - | Os05g0480700 | - | Detail |
| C1H5g25005 | 5:8,980,073-8,981,614 | - | C2H5g01527 | CX5g040064 | LOC_Os05g20050 | Os05g0280200 | - | Detail |
| C1H5g26284 | 5:9,051,646-9,054,481 | - | C2H5g28478 | CX5g038222 | LOC_Os05g20100 | Os05g0280500 | - | Detail |
| C1H5g03157 | 5:9,120,269-9,120,637 | - | C2H5g02247 | CX5g038694 | LOC_Os05g20420 | - | - | Detail |
| C1H5g29214 | 5:9,133,203-9,134,894 | - | C2H5g18533 | - | - | - | - | Detail |
| C1H5g05125 | 5:9,134,991-9,135,359 | - | C2H5g18533 | - | - | - | - | Detail |
| C1H5g08577 | 5:9,139,631-9,141,530 | - | C2H5g23953 | - | - | - | - | Detail |
| C1H5g05724 | 5:9,683,767-9,688,347 | + | C2H5g14404 | CX5g036941 | LOC_Os05g21180 | Os05g0287800 | OsIPCS3 | Detail |
| C1H5g04296 | 5:9,919,264-9,919,647 | + | C2H5g08960 | CX5g039313 | - | Os05g0289100 | - | Detail |
| C1H5g30033 | 5:9,921,175-9,923,640 | + | C2H3g30122 | CX6g041640 | - | Os04g0412350 | - | Detail |
| C1H5g26586 | 5:9,950,371-9,955,328 | - | C2H5g21346 | CX5g040894 | LOC_Os05g22260 | Os05g0289400 | - | Detail |
| C1H5g29959 | 5:9,956,464-9,956,942 | - | C2H5g29326 | CX5g040964 | LOC_Os05g22270 | - | - | Detail |
| C1H5g08048 | 5:9,965,097-9,966,597 | + | C2H5g03823 | CX5g040911 | LOC_Os05g22300 | Os05g0289700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g035552 | 4:285,746-290,848 | + | C1H4g30339 | C2H4g13201 | LOC_Os04g01480 | Os04g0105000 | - | Detail |
| CX4g034627 | 4:297,286-300,111 | + | C1H4g06405 | C2H4g26442 | LOC_Os04g01490 | Os04g0105100 | OsSIRP4 | Detail |
| CX4g033740 | 4:305,399-305,794 | + | C1H4g03836 | - | LOC_Os04g01500 | Os04g0105200 | - | Detail |
| CX4g034653 | 4:311,378-312,435 | + | C1H4g04722 | C2H4g01526 | LOC_Os04g01510 | Os04g0105300 | - | Detail |
| CX4g035814 | 4:313,812-316,621 | - | C1H4g21605 | C2H4g03214 | LOC_Os04g01520 | Os04g0105400 | - | Detail |
| CX4g033295 | 4:319,664-323,082 | - | C1H4g23453 | C2H4g10757 | LOC_Os04g01530 | Os04g0105500 | - | Detail |
| CX4g035395 | 4:326,817-328,152 | - | C1H4g29467 | C2H4g24874 | LOC_Os04g01540 | Os04g0105700 | - | Detail |
| CX4g033985 | 4:329,077-329,637 | - | - | - | - | - | - | Detail |
| CX4g036627 | 4:332,136-333,177 | - | C1H4g25930 | C2H4g21218 | LOC_Os04g01550 | - | - | Detail |
| CX4g036295 | 4:338,263-339,531 | + | C1H4g02716 | - | LOC_Os04g01560 | Os04g0105900 | - | Detail |
| CX4g033861 | 4:342,645-343,286 | - | C1H4g05576 | - | LOC_Os04g01570 | Os04g0106000 | OsPMEI17 | Detail |
| CX4g034380 | 4:354,477-360,491 | + | C1H4g26708 | C2H4g03078 | LOC_Os04g01590 | Os04g0106300 | OsARG, Nglf, Nglf-1 | Detail |
| CX4g034184 | 4:360,898-363,883 | + | C1H4g06674 | C2H4g20650 | LOC_Os04g01600 | Os04g0106400 | - | Detail |
| CX4g033512 | 4:367,899-369,728 | - | C1H4g11429 | - | LOC_Os04g01610 | Os04g0106500 | - | Detail |
| CX4g033826 | 4:377,748-377,912 | + | - | - | - | - | - | Detail |
| CX4g034282 | 4:391,949-393,641 | - | C1H4g29255 | C2H4g07398 | LOC_Os05g20980 | - | - | Detail |
| CX4g035825 | 4:396,480-398,030 | - | C1H4g17357 | C2H4g01591 | LOC_Os04g01650 | Os04g0107200 | - | Detail |
| CX4g032580 | 4:398,941-399,975 | + | C1H4g21850 | C2H4g03689 | LOC_Os04g01660 | Os04g0107300 | - | Detail |
| CX4g035079 | 4:403,693-404,725 | + | C1H4g14105 | C2H4g21992 | LOC_Os04g01674 | Os04g0107500 | - | Detail |
| CX4g033824 | 4:407,894-408,148 | - | C1H12g24303 | - | LOC_Os10g02314 | - | - | Detail |