| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g17694 | 5:1,387,037-1,392,794 | - | C2H5g16712 | CX5g039622 | LOC_Os05g03640 | Os05g0127500 | - | Detail |
| C1H5g12303 | 5:1,415,004-1,416,476 | + | C2H5g05001 | CX5g040566 | LOC_Os05g03750 | Os05g0128100 | - | Detail |
| C1H5g14002 | 5:1,429,621-1,431,545 | - | C2H5g10735 | CX5g039214 | LOC_Os05g03770 | Os05g0128300 | - | Detail |
| C1H5g27203 | 5:1,437,526-1,440,847 | - | C2H5g15512 | CX5g038112 | LOC_Os05g03780 | Os05g0128400 | OsMTP1 | Detail |
| C1H5g26071 | 5:1,450,527-1,454,746 | + | C2H5g12644 | CX5g037779 | LOC_Os05g03820 | Os05g0129000 | - | Detail |
| C1H5g17726 | 5:1,457,853-1,459,708 | + | C2H5g20670 | CX5g036800 | LOC_Os05g03830 | Os05g0129100 | - | Detail |
| C1H5g20738 | 5:1,460,007-1,462,175 | - | C2H5g08741 | CX5g040768 | LOC_Os05g03840 | Os05g0129200 | - | Detail |
| C1H5g14331 | 5:1,494,591-1,500,309 | - | C2H5g24745 | CX5g038179 | LOC_Os05g03884 | Os05g0129700 | Oskn2, OSH71, Oskn2/OSH71 | Detail |
| C1H5g16799 | 5:1,506,515-1,508,333 | - | C2H5g23667 | - | - | - | - | Detail |
| C1H5g11198 | 5:1,513,727-1,514,565 | + | C2H5g10940 | CX5g037909 | LOC_Os05g03900 | Os05g0129800 | - | Detail |
| C1H5g15292 | 5:1,515,259-1,519,290 | - | C2H5g13765 | CX5g038918 | LOC_Os05g03910 | Os05g0129900 | - | Detail |
| C1H5g09306 | 5:1,522,797-1,526,818 | + | C2H5g20349 | CX5g036768 | LOC_Os05g03920 | Os05g0130100 | - | Detail |
| C1H5g02682 | 5:1,541,276-1,542,253 | - | C2H5g13879 | - | - | - | - | Detail |
| C1H5g31896 | 5:1,558,184-1,566,344 | - | C2H5g28718 | CX5g040404 | LOC_Os05g03972 | Os05g0130400 | - | Detail |
| C1H5g15210 | 5:1,573,177-1,573,586 | - | C2H5g08536 | - | - | Os05g0130500 | - | Detail |
| C1H5g13927 | 5:1,578,202-1,582,694 | - | C2H5g17204 | CX5g040242 | LOC_Os05g04020 | Os05g0130400 | - | Detail |
| C1H5g19982 | 5:1,584,559-1,585,021 | + | C2H5g23034 | CX5g038388 | - | - | - | Detail |
| C1H5g21167 | 5:1,586,510-1,587,802 | + | C2H5g10179 | - | - | - | - | Detail |
| C1H5g11003 | 5:1,594,377-1,596,806 | - | C2H5g12456 | - | LOC_Os05g04070 | Os05g0131100 | - | Detail |
| C1H5g23202 | 5:1,599,408-1,603,800 | - | C2H5g08847 | - | LOC_Os05g04110 | Os05g0131401 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g035552 | 4:285,746-290,848 | + | C1H4g30339 | C2H4g13201 | LOC_Os04g01480 | Os04g0105000 | - | Detail |
| CX4g034627 | 4:297,286-300,111 | + | C1H4g06405 | C2H4g26442 | LOC_Os04g01490 | Os04g0105100 | OsSIRP4 | Detail |
| CX4g033740 | 4:305,399-305,794 | + | C1H4g03836 | - | LOC_Os04g01500 | Os04g0105200 | - | Detail |
| CX4g034653 | 4:311,378-312,435 | + | C1H4g04722 | C2H4g01526 | LOC_Os04g01510 | Os04g0105300 | - | Detail |
| CX4g035814 | 4:313,812-316,621 | - | C1H4g21605 | C2H4g03214 | LOC_Os04g01520 | Os04g0105400 | - | Detail |
| CX4g033295 | 4:319,664-323,082 | - | C1H4g23453 | C2H4g10757 | LOC_Os04g01530 | Os04g0105500 | - | Detail |
| CX4g035395 | 4:326,817-328,152 | - | C1H4g29467 | C2H4g24874 | LOC_Os04g01540 | Os04g0105700 | - | Detail |
| CX4g033985 | 4:329,077-329,637 | - | - | - | - | - | - | Detail |
| CX4g036627 | 4:332,136-333,177 | - | C1H4g25930 | C2H4g21218 | LOC_Os04g01550 | - | - | Detail |
| CX4g036295 | 4:338,263-339,531 | + | C1H4g02716 | - | LOC_Os04g01560 | Os04g0105900 | - | Detail |
| CX4g033861 | 4:342,645-343,286 | - | C1H4g05576 | - | LOC_Os04g01570 | Os04g0106000 | OsPMEI17 | Detail |
| CX4g034380 | 4:354,477-360,491 | + | C1H4g26708 | C2H4g03078 | LOC_Os04g01590 | Os04g0106300 | OsARG, Nglf, Nglf-1 | Detail |
| CX4g034184 | 4:360,898-363,883 | + | C1H4g06674 | C2H4g20650 | LOC_Os04g01600 | Os04g0106400 | - | Detail |
| CX4g033512 | 4:367,899-369,728 | - | C1H4g11429 | - | LOC_Os04g01610 | Os04g0106500 | - | Detail |
| CX4g033826 | 4:377,748-377,912 | + | - | - | - | - | - | Detail |
| CX4g034282 | 4:391,949-393,641 | - | C1H4g29255 | C2H4g07398 | LOC_Os05g20980 | - | - | Detail |
| CX4g035825 | 4:396,480-398,030 | - | C1H4g17357 | C2H4g01591 | LOC_Os04g01650 | Os04g0107200 | - | Detail |
| CX4g032580 | 4:398,941-399,975 | + | C1H4g21850 | C2H4g03689 | LOC_Os04g01660 | Os04g0107300 | - | Detail |
| CX4g035079 | 4:403,693-404,725 | + | C1H4g14105 | C2H4g21992 | LOC_Os04g01674 | Os04g0107500 | - | Detail |
| CX4g033824 | 4:407,894-408,148 | - | C1H12g24303 | - | LOC_Os10g02314 | - | - | Detail |