| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g00026 | 5:1,593,550-1,600,809 | + | C1H5g07219 | CX5g038241 | LOC_Os05g04160 | Os05g0132000 | - | Detail |
| C2H5g29271 | 5:1,595,963-1,602,432 | - | C1H5g01586 | CX5g039267 | LOC_Os05g04170 | Os05g0132100 | - | Detail |
| C2H5g16493 | 5:1,614,036-1,614,251 | + | C1H5g04909 | - | - | - | - | Detail |
| C2H5g30600 | 5:1,616,687-1,620,744 | - | C1H5g08013 | CX5g040727 | LOC_Os05g04180 | Os05g0132400 | - | Detail |
| C2H5g03082 | 5:1,621,361-1,626,688 | - | C1H5g03405 | CX5g039156 | LOC_Os05g04190 | Os05g0132500 | - | Detail |
| C2H5g05589 | 5:1,644,467-1,645,870 | - | C1H5g18309 | CX5g037816 | LOC_Os05g04210 | Os05g0132700 | Os2R_MYB52 | Detail |
| C2H5g27002 | 5:1,657,082-1,660,054 | - | C1H5g29537 | CX5g038861 | LOC_Os05g04220 | Os05g0133100 | - | Detail |
| C2H5g26178 | 5:1,661,192-1,662,710 | + | C1H5g10914 | CX5g036771 | LOC_Os05g04240 | Os05g0133401 | - | Detail |
| C2H5g08606 | 5:1,666,723-1,677,192 | + | C1H5g20409 | CX5g039957 | LOC_Os05g04330 | Os05g0133900 | - | Detail |
| C2H5g20537 | 5:1,677,493-1,681,355 | - | C1H5g02098 | CX5g040252 | LOC_Os05g04340 | Os05g0134000 | OsSK13 | Detail |
| C2H5g03032 | 5:1,689,651-1,691,829 | + | C1H5g20836 | CX5g038101 | LOC_Os05g04360 | Os05g0134200 | - | Detail |
| C2H5g30196 | 5:1,693,046-1,697,733 | - | C1H5g08049 | CX5g040147 | LOC_Os05g04370 | Os05g0134300 | - | Detail |
| C2H5g13007 | 5:1,704,879-1,709,667 | + | C1H5g14884 | CX5g038822 | LOC_Os05g04380 | Os05g0134400 | - | Detail |
| C2H5g21653 | 5:1,716,705-1,718,653 | + | C1H5g26531 | CX5g038822 | LOC_Os05g04410 | Os05g0134700 | - | Detail |
| C2H5g26476 | 5:1,732,788-1,733,974 | + | C1H5g31364 | CX5g038822 | LOC_Os05g04440 | Os05g0134800 | - | Detail |
| C2H5g21523 | 5:1,738,347-1,739,694 | + | C1H5g25410 | CX5g038822 | LOC_Os05g04450 | Os05g0135000 | - | Detail |
| C2H5g03728 | 5:1,741,168-1,745,500 | - | C1H5g19346 | CX5g040620 | LOC_Os05g04460 | Os05g0135100 | - | Detail |
| C2H5g10317 | 5:1,749,869-1,750,970 | + | C1H5g21635 | CX5g038822 | LOC_Os05g04470 | Os05g0135200 | - | Detail |
| C2H5g12500 | 5:1,757,263-1,758,800 | + | C1H5g11348 | CX5g038822 | LOC_Os05g04490 | Os05g0135400 | OsPRX70 | Detail |
| C2H5g16100 | 5:1,764,105-1,766,299 | + | C1H5g11788 | CX5g038822 | LOC_Os05g04500 | Os05g0135500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g034444 | 4:74,226-74,450 | - | C1H4g09455 | C2H12g12031 | LOC_Os02g17030 | - | - | Detail |
| CX4g034809 | 4:97,399-106,015 | + | C1H4g00970 | C2H4g05647 | LOC_Os04g01130 | Os04g0101300 | - | Detail |
| CX4g034027 | 4:108,252-109,863 | - | C1H4g04170 | C2H4g16448 | LOC_Os04g01140 | Os04g0101400 | CYP93G1, OsCYP93G1, OsFNSII, FNSII | Detail |
| CX4g033419 | 4:123,453-126,245 | + | C1H4g21331 | C2H4g17331 | LOC_Os04g01150 | Os04g0101700 | - | Detail |
| CX4g031572 | 4:128,662-131,658 | - | C1H4g00085 | C2H4g10066 | LOC_Os04g01160 | Os04g0101800 | SOR1 | Detail |
| CX4g033790 | 4:141,827-146,799 | + | C1H4g03520 | - | - | - | - | Detail |
| CX4g034483 | 4:160,655-161,080 | + | - | - | - | - | - | Detail |
| CX4g033539 | 4:170,118-170,297 | + | - | - | LOC_Os11g34930 | - | - | Detail |
| CX4g036467 | 4:179,224-183,762 | + | C1H4g11244 | C2H4g18592 | LOC_Os04g01230 | Os04g0102500 | - | Detail |
| CX4g033514 | 4:184,544-187,964 | - | C1H4g30914 | C2H4g15768 | LOC_Os04g01240 | Os04g0102600 | - | Detail |
| CX4g035629 | 4:189,565-198,333 | - | C1H4g22444 | C2H4g26141 | LOC_Os04g01250 | Os04g0102700 | - | Detail |
| CX4g036516 | 4:213,422-215,286 | + | C1H4g00201 | C2H4g17123 | LOC_Os04g01280 | Os04g0103100 | OsGT43H | Detail |
| CX4g032148 | 4:217,277-219,912 | - | C1H4g26895 | C2H4g02757 | LOC_Os04g01290 | Os04g0103200 | - | Detail |
| CX4g035910 | 4:222,135-224,738 | - | C1H4g14570 | C2H4g30267 | LOC_Os04g01300 | Os04g0103300 | - | Detail |
| CX4g033313 | 4:225,471-225,672 | + | - | - | - | - | - | Detail |
| CX4g034584 | 4:233,360-243,391 | - | C1H4g13951 | C2H4g15842 | LOC_Os04g01320 | Os04g0103700 | SDRLK-22 | Detail |
| CX4g034972 | 4:255,474-256,688 | - | C1H4g20505 | C2H4g20007 | LOC_Os04g01354 | Os04g0103900 | - | Detail |
| CX4g031846 | 4:272,108-272,738 | + | - | - | - | - | - | Detail |
| CX4g033547 | 4:277,778-279,958 | + | C1H4g20541 | C2H4g22862 | LOC_Os04g01470 | Os04g0104900 | - | Detail |
| CX4g034146 | 4:281,375-281,899 | + | - | - | - | - | - | Detail |