| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g07127 | 1:24,972,355-24,977,520 | + | C1H1g07251 | CX1g001461 | LOC_Os01g48900 | Os01g0681100 | - | Detail |
| C2H1g13127 | 1:24,978,962-24,984,114 | - | C1H1g21340 | CX1g007055 | LOC_Os01g48910 | Os01g0681200 | - | Detail |
| C2H1g29187 | 1:24,987,454-24,992,790 | - | C1H1g18369 | CX1g000478 | LOC_Os01g48920 | Os01g0681400 | ATG6A, OsATG6a | Detail |
| C2H1g15446 | 1:24,992,859-24,995,762 | + | C1H1g01190 | CX1g006805 | LOC_Os01g48930 | Os01g0681600 | - | Detail |
| C2H1g14692 | 1:25,005,253-25,017,023 | - | C1H1g12744 | CX1g000610 | LOC_Os01g48960 | Os01g0681900 | OsGOGAT1, NADH-GOGAT1 | Detail |
| C2H1g11093 | 1:25,032,090-25,036,165 | - | C1H1g07001 | CX1g000049 | LOC_Os01g48980 | Os01g0682200 | - | Detail |
| C2H1g19818 | 1:25,038,330-25,042,038 | + | C1H1g06026 | CX1g000149 | LOC_Os01g48990 | Os01g0682500 | - | Detail |
| C2H1g30064 | 1:25,042,425-25,048,414 | + | C1H1g18921 | CX1g000149 | LOC_Os01g49000 | Os01g0683100 | - | Detail |
| C2H1g03389 | 1:25,066,487-25,070,291 | + | C1H1g07773 | - | LOC_Os01g49010 | Os01g0683400 | OsORC4 | Detail |
| C2H1g19532 | 1:25,071,991-25,077,582 | - | C1H1g21597 | CX5g038117 | LOC_Os01g49024 | Os01g0683550 | - | Detail |
| C2H1g08995 | 1:25,078,940-25,080,482 | + | C1H1g21001 | CX1g002822 | LOC_Os01g49026 | Os01g0683600 | - | Detail |
| C2H1g03855 | 1:25,082,157-25,083,026 | + | C1H1g08336 | CX1g003922 | LOC_Os01g49030 | Os01g0683700 | - | Detail |
| C2H1g15370 | 1:25,126,110-25,129,635 | + | C1H1g07796 | CX1g000472 | LOC_Os01g49060 | Os01g0684800 | - | Detail |
| C2H1g12213 | 1:25,130,100-25,133,076 | - | C1H1g29982 | CX1g001799 | LOC_Os01g49120 | Os01g0684900 | - | Detail |
| C2H1g09209 | 1:25,137,634-25,141,087 | - | C1H1g11448 | CX1g003730 | LOC_Os01g49150 | Os01g0685200 | - | Detail |
| C2H1g29921 | 1:25,144,672-25,146,283 | + | C1H1g30171 | CX1g007197 | LOC_Os01g49160 | Os01g0685400 | RGN1 | Detail |
| C2H1g15034 | 1:25,156,413-25,167,727 | - | C1H1g13712 | CX1g004222 | LOC_Os01g49180 | Os01g0685500 | - | Detail |
| C2H1g05241 | 1:25,172,390-25,176,705 | + | C1H1g18062 | CX1g004551 | LOC_Os01g49190 | Os01g0685800 | - | Detail |
| C2H1g18560 | 1:25,177,765-25,182,302 | + | C1H1g18271 | CX1g003807 | LOC_Os01g49200 | Os01g0685900 | - | Detail |
| C2H1g28047 | 1:25,191,916-25,193,283 | + | C1H1g07342 | CX1g002173 | LOC_Os01g49230 | Os01g0686200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g034444 | 4:74,226-74,450 | - | C1H4g09455 | C2H12g12031 | LOC_Os02g17030 | - | - | Detail |
| CX4g034809 | 4:97,399-106,015 | + | C1H4g00970 | C2H4g05647 | LOC_Os04g01130 | Os04g0101300 | - | Detail |
| CX4g034027 | 4:108,252-109,863 | - | C1H4g04170 | C2H4g16448 | LOC_Os04g01140 | Os04g0101400 | CYP93G1, OsCYP93G1, OsFNSII, FNSII | Detail |
| CX4g033419 | 4:123,453-126,245 | + | C1H4g21331 | C2H4g17331 | LOC_Os04g01150 | Os04g0101700 | - | Detail |
| CX4g031572 | 4:128,662-131,658 | - | C1H4g00085 | C2H4g10066 | LOC_Os04g01160 | Os04g0101800 | SOR1 | Detail |
| CX4g033790 | 4:141,827-146,799 | + | C1H4g03520 | - | - | - | - | Detail |
| CX4g034483 | 4:160,655-161,080 | + | - | - | - | - | - | Detail |
| CX4g033539 | 4:170,118-170,297 | + | - | - | LOC_Os11g34930 | - | - | Detail |
| CX4g036467 | 4:179,224-183,762 | + | C1H4g11244 | C2H4g18592 | LOC_Os04g01230 | Os04g0102500 | - | Detail |
| CX4g033514 | 4:184,544-187,964 | - | C1H4g30914 | C2H4g15768 | LOC_Os04g01240 | Os04g0102600 | - | Detail |
| CX4g035629 | 4:189,565-198,333 | - | C1H4g22444 | C2H4g26141 | LOC_Os04g01250 | Os04g0102700 | - | Detail |
| CX4g036516 | 4:213,422-215,286 | + | C1H4g00201 | C2H4g17123 | LOC_Os04g01280 | Os04g0103100 | OsGT43H | Detail |
| CX4g032148 | 4:217,277-219,912 | - | C1H4g26895 | C2H4g02757 | LOC_Os04g01290 | Os04g0103200 | - | Detail |
| CX4g035910 | 4:222,135-224,738 | - | C1H4g14570 | C2H4g30267 | LOC_Os04g01300 | Os04g0103300 | - | Detail |
| CX4g033313 | 4:225,471-225,672 | + | - | - | - | - | - | Detail |
| CX4g034584 | 4:233,360-243,391 | - | C1H4g13951 | C2H4g15842 | LOC_Os04g01320 | Os04g0103700 | SDRLK-22 | Detail |
| CX4g034972 | 4:255,474-256,688 | - | C1H4g20505 | C2H4g20007 | LOC_Os04g01354 | Os04g0103900 | - | Detail |
| CX4g031846 | 4:272,108-272,738 | + | - | - | - | - | - | Detail |
| CX4g033547 | 4:277,778-279,958 | + | C1H4g20541 | C2H4g22862 | LOC_Os04g01470 | Os04g0104900 | - | Detail |
| CX4g034146 | 4:281,375-281,899 | + | - | - | - | - | - | Detail |