| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g28518 | 9:10,956,101-10,956,906 | + | C2H9g24898 | CX9g055525 | LOC_Os09g21380 | Os09g0381600 | - | Detail |
| C1H9g10974 | 9:10,957,499-10,969,112 | - | C2H9g18647 | CX9g056093 | LOC_Os09g21410 | Os09g0381800 | - | Detail |
| C1H9g19657 | 9:10,973,383-10,977,249 | - | C2H9g18647 | CX9g056093 | LOC_Os09g21430 | Os09g0382120 | - | Detail |
| C1H9g14369 | 9:10,984,635-10,988,181 | - | C2H9g06489 | CX9g055130 | LOC_Os09g21450 | Os09g0382300 | - | Detail |
| C1H9g10046 | 9:10,991,403-10,993,194 | - | C2H9g10297 | CX9g058028 | LOC_Os09g21460 | Os09g0382400 | - | Detail |
| C1H9g21689 | 9:10,994,697-10,997,041 | - | C2H9g07495 | CX9g056330 | LOC_Os09g21470 | Os09g0382500 | - | Detail |
| C1H9g23009 | 9:11,009,108-11,012,280 | + | C2H9g06304 | - | LOC_Os09g21490 | Os09g0294000 | - | Detail |
| C1H9g07650 | 9:11,029,889-11,035,388 | + | C2H9g14634 | CX9g055150 | LOC_Os09g21510 | Os09g0383300 | - | Detail |
| C1H9g10004 | 9:11,038,979-11,043,165 | + | C2H9g24570 | CX9g056451 | LOC_Os09g21520 | Os09g0383400 | - | Detail |
| C1H9g28479 | 9:11,093,523-11,098,163 | + | - | CX9g055899 | LOC_Os09g21660 | Os09g0384900 | qGZn9a | Detail |
| C1H9g01612 | 9:11,105,383-11,106,606 | - | - | CX9g055899 | LOC_Os09g21660 | Os09g0384900 | qGZn9a | Detail |
| C1H9g15648 | 9:11,134,707-11,135,261 | - | - | CX9g055937 | LOC_Os09g21710 | Os09g0385700 | ASL4 | Detail |
| C1H9g25406 | 9:11,140,282-11,140,533 | + | C2H9g24035 | - | - | - | - | Detail |
| C1H9g23792 | 9:11,140,579-11,142,216 | - | C2H8g28785 | CX9g055164 | LOC_Os09g21740 | Os09g0386200 | - | Detail |
| C1H9g20064 | 9:11,153,280-11,156,999 | - | C2H9g26646 | CX9g057745 | LOC_Os09g21760 | Os09g0386400 | - | Detail |
| C1H9g07383 | 9:11,160,290-11,163,198 | + | C2H9g02560 | CX9g056499 | LOC_Os09g21770 | Os09g0386500 | OsEBL2 | Detail |
| C1H9g16738 | 9:11,164,392-11,170,651 | - | C2H9g07150 | CX9g057590 | LOC_Os09g21780 | Os09g0386600 | - | Detail |
| C1H9g23102 | 9:11,183,255-11,187,623 | + | C2H9g12396 | CX9g056020 | LOC_Os09g22440 | Os09g0392000 | - | Detail |
| C1H9g00211 | 9:11,188,830-11,192,588 | + | C2H9g04209 | CX9g054898 | LOC_Os09g22450 | Os09g0392100 | OsEDS1 | Detail |
| C1H9g02506 | 9:11,207,383-11,209,019 | + | C2H9g17686 | - | - | Os12g0275400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g034444 | 4:74,226-74,450 | - | C1H4g09455 | C2H12g12031 | LOC_Os02g17030 | - | - | Detail |
| CX4g034809 | 4:97,399-106,015 | + | C1H4g00970 | C2H4g05647 | LOC_Os04g01130 | Os04g0101300 | - | Detail |
| CX4g034027 | 4:108,252-109,863 | - | C1H4g04170 | C2H4g16448 | LOC_Os04g01140 | Os04g0101400 | CYP93G1, OsCYP93G1, OsFNSII, FNSII | Detail |
| CX4g033419 | 4:123,453-126,245 | + | C1H4g21331 | C2H4g17331 | LOC_Os04g01150 | Os04g0101700 | - | Detail |
| CX4g031572 | 4:128,662-131,658 | - | C1H4g00085 | C2H4g10066 | LOC_Os04g01160 | Os04g0101800 | SOR1 | Detail |
| CX4g033790 | 4:141,827-146,799 | + | C1H4g03520 | - | - | - | - | Detail |
| CX4g034483 | 4:160,655-161,080 | + | - | - | - | - | - | Detail |
| CX4g033539 | 4:170,118-170,297 | + | - | - | LOC_Os11g34930 | - | - | Detail |
| CX4g036467 | 4:179,224-183,762 | + | C1H4g11244 | C2H4g18592 | LOC_Os04g01230 | Os04g0102500 | - | Detail |
| CX4g033514 | 4:184,544-187,964 | - | C1H4g30914 | C2H4g15768 | LOC_Os04g01240 | Os04g0102600 | - | Detail |
| CX4g035629 | 4:189,565-198,333 | - | C1H4g22444 | C2H4g26141 | LOC_Os04g01250 | Os04g0102700 | - | Detail |
| CX4g036516 | 4:213,422-215,286 | + | C1H4g00201 | C2H4g17123 | LOC_Os04g01280 | Os04g0103100 | OsGT43H | Detail |
| CX4g032148 | 4:217,277-219,912 | - | C1H4g26895 | C2H4g02757 | LOC_Os04g01290 | Os04g0103200 | - | Detail |
| CX4g035910 | 4:222,135-224,738 | - | C1H4g14570 | C2H4g30267 | LOC_Os04g01300 | Os04g0103300 | - | Detail |
| CX4g033313 | 4:225,471-225,672 | + | - | - | - | - | - | Detail |
| CX4g034584 | 4:233,360-243,391 | - | C1H4g13951 | C2H4g15842 | LOC_Os04g01320 | Os04g0103700 | SDRLK-22 | Detail |
| CX4g034972 | 4:255,474-256,688 | - | C1H4g20505 | C2H4g20007 | LOC_Os04g01354 | Os04g0103900 | - | Detail |
| CX4g031846 | 4:272,108-272,738 | + | - | - | - | - | - | Detail |
| CX4g033547 | 4:277,778-279,958 | + | C1H4g20541 | C2H4g22862 | LOC_Os04g01470 | Os04g0104900 | - | Detail |
| CX4g034146 | 4:281,375-281,899 | + | - | - | - | - | - | Detail |