| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g20866 | 4:26,990,086-26,990,352 | + | C1H4g28262 | CX4g034575 | LOC_Os04g52750 | Os04g0618400 | - | Detail |
| C2H4g09538 | 4:26,991,360-26,995,438 | - | C1H4g01403 | CX4g035558 | LOC_Os04g52760 | Os04g0618500 | - | Detail |
| C2H4g06850 | 4:26,997,594-26,998,676 | + | C1H4g16234 | CX4g034460 | LOC_Os04g52770 | Os04g0618600 | PIF1 | Detail |
| C2H4g10397 | 4:26,999,867-27,004,023 | - | C1H4g28199 | CX4g034704 | LOC_Os04g52780 | Os04g0618700 | OsFLS2 | Detail |
| C2H4g19624 | 4:27,013,456-27,014,478 | - | - | - | LOC_Os04g52800 | Os04g0618950 | - | Detail |
| C2H4g00816 | 4:27,019,472-27,022,555 | - | C1H4g22303 | CX4g036144 | LOC_Os04g52810 | Os04g0619000 | ONAC083 | Detail |
| C2H4g22466 | 4:27,026,632-27,028,484 | + | - | CX4g034825 | - | - | - | Detail |
| C2H4g08987 | 4:27,028,967-27,029,331 | + | C1H4g06933 | CX4g032452 | - | - | - | Detail |
| C2H4g28780 | 4:27,037,962-27,041,128 | + | C1H4g18636 | CX4g031427 | LOC_Os04g52830 | Os04g0619300 | Ctb1 | Detail |
| C2H4g02197 | 4:27,042,195-27,045,554 | - | C1H4g13931 | CX4g035196 | LOC_Os04g52840 | Os04g0619400 | OsRLCK160 | Detail |
| C2H4g23444 | 4:27,051,632-27,054,535 | + | C1H4g15202 | CX4g033062 | LOC_Os04g52850 | Os04g0619500 | - | Detail |
| C2H4g18841 | 4:27,056,658-27,059,192 | - | C1H4g24641 | CX4g033748 | LOC_Os04g52860 | Os04g0619600 | - | Detail |
| C2H4g25907 | 4:27,063,020-27,066,257 | - | C1H4g04907 | - | - | - | - | Detail |
| C2H4g02631 | 4:27,069,306-27,070,566 | + | - | - | LOC_Os04g52880 | Os04g0619800 | - | Detail |
| C2H4g06612 | 4:27,079,390-27,084,156 | + | C1H4g18235 | CX4g036286 | LOC_Os04g52890 | Os04g0619900 | - | Detail |
| C2H4g03746 | 4:27,084,868-27,097,303 | - | C1H4g18046 | CX4g032062 | LOC_Os04g52900 | Os04g0620000 | MRP1, OsABCC1, OsABCC1-1, OsABCC1-2, OsMRP1 | Detail |
| C2H4g26107 | 4:27,101,123-27,101,539 | - | - | - | LOC_Os04g52910 | - | - | Detail |
| C2H4g21419 | 4:27,104,775-27,105,700 | + | - | - | - | - | - | Detail |
| C2H4g02835 | 4:27,106,476-27,108,281 | + | C1H4g11396 | CX4g031475 | LOC_Os04g52920 | Os04g0620200 | GSD1, OsREM6.6, REM6.6 | Detail |
| C2H4g19928 | 4:27,114,110-27,124,400 | + | C1H4g24139 | CX4g032286 | LOC_Os04g52940 | Os04g0620500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g030915 | 3:33,553,003-33,553,569 | - | C1H3g19498 | C2H3g13096 | LOC_Os03g64260 | Os03g0860100 | OsERF83 | Detail |
| CX3g027910 | 3:33,559,446-33,576,186 | - | C1H3g08606 | C2H3g04480 | LOC_Os03g64290 | Os03g0860700 | - | Detail |
| CX3g029996 | 3:33,579,728-33,585,680 | + | C1H3g27781 | C2H3g22239 | LOC_Os03g64300 | Os03g0860900 | - | Detail |
| CX3g030247 | 3:33,586,070-33,586,342 | - | - | - | LOC_Os03g64310 | Os03g0861000 | - | Detail |
| CX3g027284 | 3:33,587,581-33,597,738 | + | C1H3g04412 | C2H3g11459 | LOC_Os03g64320 | Os03g0861100 | - | Detail |
| CX3g030775 | 3:33,599,666-33,600,517 | + | C1H3g25012 | C2H3g28085 | LOC_Os03g64330 | Os03g0861300 | - | Detail |
| CX3g031284 | 3:33,605,410-33,606,785 | - | C1H3g04119 | C2H3g16452 | LOC_Os03g64340 | Os03g0861400 | - | Detail |
| CX3g030656 | 3:33,613,530-33,618,194 | - | C1H3g17429 | C2H3g12472 | LOC_Os03g64350 | Os03g0861700 | - | Detail |
| CX3g028909 | 3:33,618,497-33,623,655 | + | C1H3g24824 | C2H3g08959 | LOC_Os03g64370 | Os03g0861900 | - | Detail |
| CX3g027005 | 3:33,625,067-33,626,208 | - | - | - | LOC_Os03g64380 | - | - | Detail |
| CX3g028337 | 3:33,626,811-33,628,130 | - | - | - | LOC_Os03g64390 | Os03g0862000 | - | Detail |
| CX3g029193 | 3:33,631,570-33,637,991 | + | C1H3g08341 | C2H3g16629 | LOC_Os03g64400 | Os03g0862100 | - | Detail |
| CX3g025867 | 3:33,642,180-33,642,356 | - | - | - | - | Os03g0862200 | - | Detail |
| CX3g027325 | 3:33,642,376-33,643,088 | - | C1H7g10723 | C2H3g28738 | LOC_Os03g64415 | Os07g0105700 | OsDLK | Detail |
| CX4g032077 | 4:11,739-12,138 | + | - | - | - | - | - | Detail |
| CX4g032894 | 4:15,892-19,423 | + | C1H4g00861 | C2H4g13233 | LOC_Os04g01070 | Os04g0100300 | - | Detail |
| CX4g034451 | 4:39,257-39,481 | - | C1H4g09455 | C2H12g12031 | LOC_Os02g17030 | - | - | Detail |
| CX4g036339 | 4:42,218-50,111 | + | C1H4g03520 | - | LOC_Os03g21310 | Os08g0514300 | - | Detail |
| CX4g035430 | 4:50,538-52,967 | - | C1H4g27704 | - | LOC_Os08g33270 | Os04g0127900 | - | Detail |
| CX4g034951 | 4:56,100-58,282 | - | - | C2H11g07074 | - | - | - | Detail |